EGAF00005411774 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411774
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3156834
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAA	15716	0.49784055797675775	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	10575	0.3349875223087435	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9367	0.29672133536321516	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAA	7954	0.2519613004674937	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	7119	0.22551074906060944	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCAA	7110	0.22522565329694244	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7095	0.22475049369083075	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7076	0.22414862485642262	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAA	4768	0.15103740012937011	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4047	0.12819806172893475	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT	3591	0.11375320970313928	No Hit
ACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3256	0.10314131183331147	No Hit
GGTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCA	3175	0.10057544996030833	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	5265	61.360386	1
TGGTATC	5700	57.340626	2
GCGTCAG	1045	49.61974	4
AGCGTCA	1140	43.993454	3
GGTATCA	11175	39.17983	1
GCAGCGT	1315	38.144253	1
CGTCAGA	1395	37.47561	5
GTATCAA	20260	37.388763	1
TATCAAC	23720	32.217064	2
ATATACG	12000	31.841196	2
GATATAC	11800	31.520922	1
ATACGCA	12675	30.145512	4
ATCAACG	25485	30.06921	3
CAGCGTC	1700	30.00152	2
TATACGC	12790	29.940924	3
CGCATTG	12725	29.759857	7
TACGCAT	12900	29.686083	5
TCAACGC	26170	29.282148	4
CAACGCA	26560	28.980658	5
ACGCATT	13250	28.646664	6