EGAF00005411790 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411790
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1193462
Sequences flagged as poor quality	0
Sequence length	91
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAA	5182	0.4341989941866603	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	3266	0.2736576447343945	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2844	0.2382983287276847	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAA	2447	0.20503375892990308	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCAA	2407	0.2016821649956178	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	2232	0.1870189415331196	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2139	0.1792264856359063	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2069	0.173361196250907	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAA	1508	0.12635509132255573	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	1915	51.72046	1
TGGTATC	1945	50.479256	2
AGCGTCA	320	45.159542	3
GGTATCA	3735	39.49245	1
CGTCAGA	395	38.73863	5
GTATCAA	6855	37.826626	1
GCGTCAG	395	37.660976	4
TATCAAC	7780	33.7621	2
GCAGCGT	470	30.750788	1
ATCAACG	8695	30.45363	3
TCAACGC	8890	29.97688	4
CAACGCA	9055	29.666576	5
ATATACG	4265	29.398394	2
GATATAC	4165	28.781229	1
CAGCGTC	505	28.61595	2
AACGCAG	9535	28.351446	6
CGCATTG	4435	28.270323	7
TACGCAT	4530	27.96127	5
ATACGCA	4480	27.797787	4
TATACGC	4600	27.257423	3