EGAF00005411801 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411801
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	120385
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	458	0.3804460688623998	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	447	0.3713087178635212	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	279	0.23175644806246626	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCCTGTCTCTTATACACATCTGACGCTGCCG	203	0.1686256593429414	No Hit
GTATCAACGCAGAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	193	0.16031897661668815	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCCTGTCTCTTATACACATCTGA	167	0.13872160152842963	No Hit
GCGTATATCTGGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCCG	148	0.12293890434854841	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACCTGTCTCTTATACACA	140	0.11629355816754579	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACAGGT	20	2.59906E-4	55.02203	1
TCTAGGG	15	0.005761941	55.02203	2
ATACGTG	15	0.005771428	54.99917	4
CTAGGGT	15	0.005771428	54.99917	3
GTGGTAT	380	0.0	47.05831	1
GTCTAGG	25	7.812952E-4	44.01762	1
GTATCAC	25	7.812952E-4	44.01762	1
TGGTATC	440	0.0	40.641273	2
CGACGAT	30	0.0019189317	36.666115	55
TAGGTGA	30	0.0019189317	36.666115	35
GGCAATT	70	4.0199666E-9	35.35661	20
AGTGGTA	55	8.5871943E-7	35.01402	2
ACGGGGC	75	7.8835E-9	32.9995	16
CAGGTAT	35	0.0040771924	31.441158	2
GGGGCAA	70	1.588869E-7	31.428097	18
GAAATCC	35	0.0040855003	31.428097	15
AGTTTAG	35	0.0040855003	31.428097	17
AACTTTG	35	0.0040855003	31.428097	49
AGCTTAA	35	0.0040855003	31.428097	10
CGGGGCA	70	1.588869E-7	31.428097	17