EGAF00005411807 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411807
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	136136
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	448	0.3290826820238585	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	376	0.27619439384145267	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	198	0.14544279250161604	No Hit
GTATCAACGCAGAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	179	0.13148616089792559	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	144	0.10577657636481165	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTAGGG	15	0.005756691	55.0386	2
CTAGGGA	15	0.005765074	55.018375	3
ATCTCGC	15	0.0057734656	54.99816	20
GCAAGTC	15	0.0057734656	54.99816	34
GGGGCCA	15	0.0057734656	54.99816	29
GTGGTAT	400	0.0	49.534744	1
TTAAACG	25	7.8333006E-4	43.99853	22
TGGTATC	445	0.0	43.288788	2
CGGGTAC	40	1.8931471E-4	34.37385	17
GGTACCA	35	0.0040877303	31.427523	19
CCAGGCG	35	0.0040877303	31.427523	29
GGGATTC	35	0.0040877303	31.427523	18
TGCCGAC	80	1.4821126E-8	30.936468	55
CACTGCT	45	3.7788926E-4	30.554535	16
ACTGGCA	45	3.7788926E-4	30.554535	8
TACGGGT	85	2.6731868E-8	29.116676	15
GTATCAA	1850	0.0	28.709326	1
CCCTTGA	50	6.971225E-4	27.519302	1
GTCGACA	40	0.007850454	27.499083	14
AGTCACA	50	7.0012663E-4	27.499083	45