EGAF00005411819 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411819
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	78673
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	252	0.3203131951241214	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	218	0.2770963354645177	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCCTGTCTCTTATACACATCTGACGCTGCCG	154	0.19574695257585195	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	136	0.1728674386384147	No Hit
GCGTATATCTGGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCCG	112	0.14236142005516506	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCCTGTCTCTTATACACATCTGA	106	0.13473491540935265	No Hit
GCCACAATGCGTATATCTGGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGA	96	0.12202407433299861	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACCTGTCTCTTATACACA	89	0.1131264855795508	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTGAAC	15	0.0057636723	55.0	3
GCTGGTA	20	2.598643E-4	55.0	7
CTGGTAT	20	2.598643E-4	55.0	8
CCAAACA	15	0.0057636723	55.0	1
TATCCCG	15	0.0057636723	55.0	12
GTGGTAT	190	0.0	49.210526	1
TTTCCCT	25	7.81178E-4	44.0	5
AGCTGGT	25	7.81178E-4	44.0	6
TGGTATC	220	0.0	42.5	2
AATAAGC	30	0.0019147507	36.666668	2
GTATCAA	1025	0.0	32.463417	1
GAATAAG	35	0.004076665	31.428572	1
TATCAAC	1150	0.0	28.695654	2
CGAGGGG	90	4.6033165E-8	27.500002	10
CGACTTT	50	6.973451E-4	27.5	3
GAAGGGC	40	0.0078293625	27.5	26
GGTATCA	405	0.0	26.481482	1
CGGGGAA	95	7.775998E-8	26.052631	17
ACCAGCT	65	1.0763902E-4	25.384615	23
GACTTTT	55	0.0012164211	25.0	4