EGAF00005411821 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411821
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	202887
Sequences flagged as poor quality	0
Sequence length	61
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	468	0.23067027458634612	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	383	0.18877503240720203	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCCTGTCTCTTATACACATCTGACGCTGCCG	238	0.11730667810160335	No Hit
GTATCAACGCAGAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	231	0.11385648168685031	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	230	0.11336359648474274	No Hit
GCGTATATCTGGCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACGCTGCCG	207	0.10202723683626845	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCCTGTCTCTTATACACATCTGA	203	0.10005569602783816	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	480	0.0	46.4508	1
TGGTATC	520	0.0	42.856514	2
CTATAGT	30	0.001922146	36.66568	4
GAGCGCC	30	0.001922146	36.66568	11
GACAGGT	65	8.26567E-8	33.878647	1
CGGGAAA	60	1.7083621E-6	32.08247	17
GCCGGTC	35	0.0040922905	31.427725	7
TATAGTC	35	0.0040922905	31.427725	5
CCGGTCC	35	0.0040922905	31.427725	8
TTTTCCG	35	0.0040922905	31.427725	5
ATAAGCT	55	3.4774755E-5	29.999193	3
GTATCAA	2170	0.0	29.936546	1
TATCAAC	2325	0.0	28.045328	2
GACAGGA	60	6.2515406E-5	27.5264	1
GGATGTA	40	0.007859145	27.49926	19
CGCGCTA	50	7.0129416E-4	27.49926	28
TCGACAT	50	7.0129416E-4	27.49926	9
TAATCTA	40	0.007859145	27.49926	20
AGAGTAC	1275	0.0	25.665976	11
TACATCC	65	1.08483946E-4	25.383934	43