EGAF00005411848 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411848
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1881864
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAA	10274	0.5459480600085873	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAA	5209	0.2768000238061836	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	4140	0.21999464360867735	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4116	0.21871931234138065	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3580	0.19023691403842147	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3132	0.16643073038221678	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	2770	0.14719448376715852	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAA	2117	0.11249484553612801	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2051	0.10898768455106214	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	2165	58.114666	1
TGGTATC	2285	54.497383	2
GCGTCAG	380	48.093967	4
ATATACG	5195	45.241165	2
GATATAC	5185	43.366943	1
TATACGC	5445	42.929813	3
CGCATTG	5475	42.853256	7
ATACGCA	5525	42.386257	4
GGTATCA	4510	41.46943	1
TACGCAT	5700	41.16168	5
AGCGTCA	465	40.215546	3
ACGCATT	6105	38.84981	6
GCATTGT	6140	37.865856	8
CGTCAGA	510	37.503445	5
GTATCAA	8100	37.310966	1
CATTGTG	6930	33.79459	9
TATCAAC	9900	30.823606	2
ATCAACG	10890	28.138542	3
TCAACGC	11020	27.691637	4
CAACGCA	11120	27.367622	5