EGAF00005411852 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411852
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1650690
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAA	10207	0.6183474789330522	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAA	4818	0.29187794195154754	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	4319	0.26164815925461476	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4255	0.25777099273637083	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4109	0.24892620661662698	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3232	0.19579690917131623	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	2807	0.17005010026110293	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAA	2656	0.16090241050712129	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2205	0.13358050269887137	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCAA	1690	0.10238142837237761	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	2065	49.81137	2
GTGGTAT	2175	48.467644	1
GGTATCA	4390	43.572	1
ATATACG	5090	42.67134	2
ATACGCA	5220	41.445793	4
CGCATTG	5195	41.15434	7
GATATAC	5180	40.947773	1
TATACGC	5325	40.708374	3
TACGCAT	5375	40.330914	5
ACGCATT	5490	39.33363	6
GCATTGT	5580	38.16249	8
AGCGTCA	460	37.884293	3
GTATCAA	7875	36.59642	1
CATTGTG	6310	33.747498	9
CGTCAGA	555	31.400547	5
TATCAAC	9455	30.613907	2
GCGTCAG	575	30.307438	4
CAGCGTC	580	30.046165	2
ATCAACG	10035	29.09863	3
TCGAGGG	3585	29.047592	9