EGAF00005411854 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411854
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1408794
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAA	10762	0.7639158031621373	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAA	5246	0.3723752372596703	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	4455	0.31622792260614396	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4097	0.29081611647976924	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3764	0.26717887782032007	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3081	0.21869769462391236	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	2903	0.20606277425940203	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAA	2851	0.20237167392819672	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2173	0.15424540422517416	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCAA	1888	0.1340153351022222	No Hit
GAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	1690	0.11996076076417134	No Hit
CATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1634	0.11598572963825797	No Hit
GACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAA	1487	0.10555127293273538	No Hit
ACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1436	0.10193115530020712	No Hit

Adapter graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	2345	53.113434	1
TGGTATC	2485	50.28862	2
GCGTCAG	405	45.129677	4
AGCGTCA	400	43.568504	3
ATATACG	5680	43.329033	2
GGTATCA	4565	42.276073	1
CGTCAGA	455	42.041744	5
GATATAC	5740	41.472073	1
ATACGCA	5970	41.366673	4
CGCATTG	5930	41.14249	7
TATACGC	6085	40.65474	3
TACGCAT	6110	40.28255	5
GCATTGT	6305	38.62806	8
ACGCATT	6435	38.581112	6
GTATCAA	8155	36.644684	1
CATTGTG	6985	34.74586	9
GCAGCGT	515	34.66743	1
CAGCGTC	515	33.83961	2
TCGAGGG	3805	31.501255	9
TATCAAC	10115	29.541885	2