EGAF00005411861 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411861
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62740
Sequences flagged as poor quality	0
Sequence length	61
%GC	54

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	16292	25.967484858144722	No Hit
GTCCCATAAGGTCATGTATTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	170	0.2709595154606312	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	117	0.18648390181702262	No Hit
GTCAAGTAGGAAAGTCCCATAAGGTCATGTATTGGGCAAAAAAAAAAAAAAAAAAAAAAAA	103	0.1641695887790883	No Hit
GTAGGAAAGTCCCATAAGGTCATGTATTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	98	0.15620019126554033	No Hit
GTCCCATAAGGTCATGTATTGGGCATAATGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	89	0.14185527574115397	No Hit
CCCATAAGGTCATGTATTGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	72	0.11475932419509084	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	70	0.11157156518967166	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTCAAT	20	2.584526E-4	55.043095	1
ATGGCTG	15	0.005758564	54.999203	35
TAATGGC	15	0.005758564	54.999203	33
TCAATAC	20	2.5947473E-4	54.999203	3
AATGGCT	15	0.005758564	54.999203	34
AATACTA	20	2.5947473E-4	54.999203	5
GTGGTAT	150	0.0	47.70402	1
TGGTATC	155	0.0	46.128365	2
TTCAATA	25	7.800159E-4	43.99936	2
GAATGCT	25	7.800159E-4	43.99936	32
AGAATGC	25	7.800159E-4	43.99936	31
CAATACT	25	7.800159E-4	43.99936	4
TGCTCAC	25	7.800159E-4	43.99936	35
ATACTAC	25	7.800159E-4	43.99936	6
TACCAAC	25	7.800159E-4	43.99936	10
CTACCAA	25	7.800159E-4	43.99936	9
TACTACC	25	7.800159E-4	43.99936	7
ACTACCA	25	7.800159E-4	43.99936	8
TTGAGGC	35	8.575013E-5	39.285145	15
TGTGTAT	35	8.575013E-5	39.285145	3