EGAF00005411875 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411875
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	575181
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1819	0.3162482766294436	No Hit
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1699	0.2953852787209591	No Hit
GTATCAACGCAGAGTACGGGATACCAGCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAAAA	1168	0.2030665129759154	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	964	0.16759941653149182	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	690	0.11996223797378563	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCCTGTCTCTTATACACATCTGACGCTGCCG	634	0.11022617228315956	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCCTGTCTCTTATACACATCTGA	589	0.10240254806747788	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	1780	0.0	44.52521	1
TGGTATC	1990	0.0	40.223934	2
TGCTTAA	200	0.0	39.87487	19
TTAAACG	180	0.0	38.194324	22
ACGGTCC	30	0.0019256759	36.663364	16
GACAGGT	235	0.0	32.78866	1
CCTGCTA	35	0.0040980107	31.428473	45
CACTGCT	290	0.0	31.290285	16
CTGCTTA	255	0.0	31.27441	18
GAGTCTA	55	3.4879173E-5	29.999907	12
GTATCAA	8155	0.0	29.628117	1
ACCACTG	335	0.0	27.91036	14
AGGTCGT	40	0.007870039	27.499914	22
TATCAAC	8955	0.0	26.785238	2
CCCTTGA	250	0.0	26.418291	1
AGAGTAC	4455	0.0	25.30856	11
CAGAGTA	4575	0.0	25.005386	10
CTAGTAC	55	0.0012258318	24.999922	3
GGTATCA	3785	0.0	24.501772	1
ATCAACG	9800	0.0	24.160637	3