EGAF00005411880 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411880
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5754725
Sequences flagged as poor quality	0
Sequence length	91
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAA	50267	0.8734909139880707	No Hit
GATATACGCATTGTGGCAGTACATCAAGGCAAAAAAAAAAAAAAAAAAAA	26418	0.45906624556342834	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	20927	0.36364900147270285	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	20374	0.3540395066662612	No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16826	0.29238582208532987	No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15948	0.277128794164795	No Hit
GTGGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTT	13977	0.24287867795594054	No Hit
GATATACGCATTGTGGCAGTACATCAAGCCAAAAAAAAAAAAAAAAAAAA	12746	0.22148756022225216	No Hit
GTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCAA	11856	0.20602200800212	No Hit
GGTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9656	0.16779255307595062	No Hit
CATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8787	0.15269191838011373	No Hit
ACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6404	0.11128246788508574	No Hit
TATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6245	0.10851952091542166	No Hit
GGTATCAACGCAGAGTACGGGCCAGATATACGCATTGTGGCAGTACATCA	6222	0.10811984934119355	No Hit
TATACGCATTGTGGCAGTACATCAAGGGAAAAAAAAAAAAAAAAAAAAAA	6129	0.10650378601931457	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	10120	57.662483	2
GTGGTAT	10240	56.790077	1
CGTCAGA	1290	48.102787	5
GCGTCAG	1430	43.393044	4
GGTATCA	22595	40.599945	1
ATATACG	29440	39.527462	2
GATATAC	29010	38.641033	1
ATACGCA	30305	38.273006	4
AGCGTCA	1600	38.251266	3
CGCATTG	30470	38.010616	7
GTATCAA	40095	37.277344	1
TATACGC	31150	37.221134	3
TACGCAT	31560	36.926453	5
ACGCATT	32530	35.89224	6
GCATTGT	32735	35.367603	8
CATTGTG	35235	32.858192	9
TATCAAC	47250	31.878304	2
ATCAACG	52410	28.828947	3
TCAACGC	52805	28.5972	4
CAACGCA	53850	28.105633	5