EGAF00005411899 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411899
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	98322
Sequences flagged as poor quality	0
Sequence length	61
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1311	1.3333740159882834	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	515	0.5237891824820488	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	384	0.3905534875205956	No Hit
GGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	196	0.19934500925530402	No Hit
GTATCAACGCAGAGTACGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	179	0.18205488090152763	No Hit
GGTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	160	0.16273061980024817	No Hit
GTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	148	0.15052582331522954	No Hit
GTGGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	107	0.10882610199141596	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCTCG	15	0.005758446	55.0229	4
TACGGGT	15	0.0057700584	54.994915	15
GGCTCGG	15	0.0057700584	54.994915	5
GTGGTAT	225	0.0	46.53483	1
TGGTATC	235	0.0	44.531925	2
GACAGGT	45	1.7548518E-7	42.861027	1
ACTGCTT	35	8.614676E-5	39.28208	17
TTATCGT	30	0.0019179509	36.663277	22
ATACCAC	65	8.2680344E-8	33.843025	12
ACAGGTA	50	1.7855631E-5	33.047375	2
TCGAGGG	85	7.421477E-10	32.34995	9
CATTATG	35	0.0040834337	31.425665	14
TATAAAC	45	3.7389723E-4	30.599424	2
GCTTAAA	45	3.7726274E-4	30.55273	20
TTAAACG	45	3.7726274E-4	30.55273	22
GATACCA	65	3.168876E-6	29.612646	11
GTATCAA	1115	0.0	29.406893	1
ACCACTG	75	2.9014518E-7	29.330622	14
CGAGGGT	85	2.6588168E-8	29.114954	10
CGGGGGA	95	2.4392648E-9	28.944693	17