EGAF00005411924 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411924
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	883372
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4275	0.48394108031497485	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3001	0.3397209782515181	No Hit
CTTATACACATCTCCGAGCCCACGAGACGGAGCTACATCTCGTATGCCGT	2908	0.32919313720606946	No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2503	0.2833460874920192	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	2491	0.28198765638938067	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2004	0.22685799414063385	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1877	0.21248126497104275	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1738	0.19674610469881318	No Hit
ATATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1514	0.17138872411622735	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1185	0.13414507138555445	No Hit
TATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1169	0.13233382991536974	No Hit
AGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1050	0.11886272148087104	No Hit
GGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1004	0.11365540225409	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	964	0.10912729857862825	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	909	0.10290115602486834	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTACG	725	0.0	62.147827	1
ATACGGG	405	0.0	59.824333	1
GTGGTAT	2085	0.0	58.71438	1
TGGTATC	2300	0.0	57.654823	2
GACCGTC	30	2.2556972E-4	56.662853	7
ATATCAA	1630	0.0	40.159767	1
CAGTACG	55	9.5510775E-5	38.642513	1
AGTATCA	650	0.0	37.275166	1
GGTATCA	3960	0.0	34.666996	3
GTATCAA	7225	0.0	32.828754	1
TATCAAC	9270	0.0	32.55274	2
GTCGAGG	1945	0.0	30.805954	8
ATCAACG	10380	0.0	28.866934	3
TCGAGGT	2005	0.0	28.824362	9
TCAACGC	10465	0.0	28.591856	4
AGTCGAG	2485	0.0	28.559446	7
TCTACGC	60	0.006803216	28.334637	3
ACGTGCG	75	5.9088384E-4	28.329826	9
CAACGCA	10590	0.0	28.254368	5
AACGCAG	10840	0.0	27.759577	6