EGAF00005411965 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411965
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	853652
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	9141	1.0708110564960898	No Hit
GTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3659	0.4286289963591722	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2703	0.31663956741154475	No Hit
GGTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1577	0.18473570026193345	No Hit
GTATCAACGCAGAGTACGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1459	0.170912737274674	No Hit
GGTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1392	0.16306410574800972	No Hit
TATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1213	0.14209537375886191	No Hit
GACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTTGCTTTTCCTCCGCAACCATGTCTGAC	1035	0.12124378552384343	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	989	0.11585517283389485	No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCT	988	0.11573802907976552	No Hit
CTTCTAAGTCTTCATATTTTCTCTTAAAATCTTAAGCTATTAAAATTACGTTAAAAACTTA	929	0.1088265475861358	No Hit
GTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGT	926	0.10847511632374786	No Hit
CCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGTTTCTTTGGAAGGCAGTGGAT	862	0.10097791605947154	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTGAA	20	2.6123802E-4	55.00369	13
ACTACGC	15	0.005782907	55.00047	17
TCGACTA	20	2.6131366E-4	55.000465	15
TACGTGG	30	3.4902747E-5	45.833725	15
CCACGCA	25	7.8550086E-4	44.000378	17
GTGGTAT	3840	0.0	38.54931	1
TGGTATC	3930	0.0	37.849903	2
GCGTCGA	30	0.0019247107	36.66913	13
AGTACGT	65	8.38445E-8	33.848423	13
CGGGTCA	35	0.0040988764	31.42884	17
CATATAC	35	0.0040988764	31.42884	44
TTTCCGT	35	0.0040988764	31.42884	23
GAGTTAG	35	0.0040988764	31.42884	32
ATACGAA	35	0.0040988764	31.42884	47
TCTATAC	35	0.004102405	31.423315	2
ACAACGC	35	0.004103582	31.421476	4
CATACTA	45	3.794545E-4	30.555815	21
TGTCGCC	55	3.4882018E-5	30.002014	10
AAGTCTA	55	3.4965844E-5	29.991467	7
GTACGTG	65	3.2027456E-6	29.61737	14