EGAF00005411985 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411985
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	819598
Sequences flagged as poor quality	0
Sequence length	61
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	4992	0.6090790851124576	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2013	0.24560821280676626	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1343	0.16386081957252213	No Hit
GTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1151	0.1404347009143507	No Hit
GGTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1003	0.1223770677820102	No Hit
GTATCAACGCAGAGTACGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	968	0.11810668156828102	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	2485	0.0	41.94165	2
GTGGTAT	2520	0.0	41.501198	1
GGCTATG	40	1.892219E-4	34.40231	1
ACTAGAC	35	0.004097727	31.430492	3
CGTAAGT	35	0.004098952	31.428572	26
ATTGCCG	35	0.004100177	31.426655	20
CCCATTA	35	0.0041026287	31.422817	13
CTAGACA	35	0.0041038543	31.420898	4
GTAACAC	35	0.004105081	31.418982	8
ACGGGTA	155	0.0	28.385365	16
GCCTAGC	40	0.0078671435	27.503359	44
CGCACCT	60	6.310332E-5	27.503359	48
CGACACG	40	0.007869488	27.50168	40
GCGGCAA	60	6.315583E-5	27.5	27
GGCAACG	40	0.007878872	27.494965	13
CGGGGAT	165	0.0	26.66504	17
AATTGTC	65	1.0890408E-4	25.383066	20
GTATCAA	8800	0.0	25.113684	1
GTCAACG	55	0.0012258173	25.001528	3
CCGCTCG	80	1.6059785E-5	24.06544	21