EGAF00005411994 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411994
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	309622
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1032	0.3333096485391865	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	901	0.2909999935405107	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	557	0.17989677736078186	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	426	0.13758712236210605	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	423	0.1366181989651898	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	407	0.13145060751496987	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT	382	0.12337624587400119	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	342	0.11045726724845134	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	312	0.10076803327928893	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	415	0.0	51.206375	2
GTGGTAT	395	0.0	49.503174	1
GTATCAA	1740	0.0	48.615654	1
TATCAAC	2005	0.0	47.270763	2
AAGTACG	155	0.0	46.621853	1
ATACGGG	95	2.3646862E-11	44.74543	1
AGTATCA	120	0.0	42.50816	1
CAACGCA	2355	0.0	40.06491	5
ATCAACG	2430	0.0	38.828342	3
TCAACGC	2485	0.0	37.968964	4
AACGCAG	2555	0.0	37.427753	6
ATACCTT	70	9.224472E-6	36.429676	6
CGGGAAC	125	4.4201443E-10	34.001034	6
GGTATCA	670	0.0	33.62586	1
ACGGGAT	65	2.5486134E-4	32.693302	3
CGCAGAG	2900	0.0	32.383686	8
ACGCAGA	2980	0.0	31.947279	7
GCAGAGT	3025	0.0	31.185995	9
ATAGGAC	75	5.894775E-4	28.334194	3
AGTGTCC	60	0.006802374	28.329618	8