EGAF00005411995 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411995
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	309622
Sequences flagged as poor quality	0
Sequence length	61
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1620	0.5232186343347695	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	400	0.12918978625549865	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTCGG	15	0.005781178	54.996284	33
GTCGTCG	15	0.005781178	54.996284	32
GTCGGAA	25	7.8501675E-4	43.99703	35
GTGGTAT	535	0.0	39.62798	1
TGGTATC	545	0.0	38.346035	2
TTAAACG	65	1.9699655E-9	38.07435	22
CGCGCTA	30	0.0019240903	36.66419	28
CGTCGGA	30	0.0019240903	36.66419	34
GGTTCCC	35	0.004093164	31.431526	50
ACCGTCT	35	0.0040964033	31.426449	38
GCGCTAC	35	0.0040964033	31.426449	29
GTCTCGC	45	3.7620694E-4	30.593029	1
GTATAAC	40	0.007817488	27.533728	1
TGCTTAA	110	3.929017E-10	27.498142	19
CGCTCCG	40	0.00786699	27.498142	5
CGGGCCA	40	0.00786699	27.498142	17
GCTCCGT	40	0.00786699	27.498142	6
ATCTGCG	50	7.0230087E-4	27.498142	36
GTATCAA	2140	0.0	27.14774	1
ACTGAGC	55	0.0012250124	24.99831	8