EGAF00005411998 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005411998
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	314780
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	776	0.24652138001143659	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	689	0.21888302941737084	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	548	0.17408984052354026	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	486	0.15439354469788424	No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGCGCTCATCTCGTATGCCGT	408	0.12961433382044604	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	383	0.12167227905203636	No Hit
ATATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	351	0.11150644894847195	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	351	0.11150644894847195	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTCGTG	25	0.0077826786	51.01383	5
GTGGTAT	415	0.0	45.072456	1
TGGTATC	505	0.0	43.77424	2
TAGTACT	50	5.4342185E-5	42.511524	4
GTACCGG	40	9.2966657E-4	42.51152	6
ATATCAA	405	0.0	38.837685	1
TAGACTG	45	0.0016590009	37.78802	5
GTCCAAG	45	0.0016590009	37.78802	1
TGTACCG	45	0.0016590009	37.78802	5
CCGGCCA	45	0.0016615932	37.776016	9
GTATCAA	1510	0.0	37.725456	1
CCTAGTA	80	5.384609E-7	37.197582	2
TATCAAC	1990	0.0	36.10275	2
ATACGGG	100	8.014831E-8	34.009216	1
TCGACAC	25	0.002788671	33.998413	60-61
TACCGGC	50	0.0027865632	33.998413	7
ATCAACG	2175	0.0	33.03194	3
TCAACGC	2195	0.0	32.730965	4
CTAGACT	65	2.5451113E-4	32.70117	4
CAACGCA	2240	0.0	31.88364	5