EGAF00005412003 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412003
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	279873
Sequences flagged as poor quality	0
Sequence length	61
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1904	0.6803085685292972	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	953	0.34051158918509467	No Hit
GTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	649	0.2318908933694926	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	543	0.1940165718022103	No Hit
GTATCAACGCAGAGTACGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	500	0.17865246022302975	No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCT	457	0.16328834864384917	No Hit
GGTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	424	0.15149728626912923	No Hit
GTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGT	399	0.14256466325797773	No Hit
CCTCATTACGATTCGCCTGCTTGCTTCTCCTGTTCAATCGTTTCTTTGGAAGGCAGTGGAT	375	0.13398934516727232	No Hit
GTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTTGCTTTTCCT	361	0.12898707628102746	No Hit
GACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTTGCTTTTCCTCCGCAACCATGTCTGAC	356	0.12720055167879718	No Hit
GAAGAAGACAGAGACGCAAGAGAAAAATCCACTGCCTTCCAAAGAAACGATTGAACAGGAG	318	0.1136229647018469	No Hit
GTACATTCCACAAGCATTGCCTTCTTATTTTACTTCTTTTAGCTGTTTAACTTTGTAAGAT	315	0.11255104994050873	No Hit
GTGCTGCCCCTTTCACATCAAAGAACTACTGACAACGAAGGCCGCGCCTGCCTTTCCCATC	297	0.10611956137247967	No Hit
GCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTACTCTAGATTTCACTGTCGTC	290	0.10361842692935723	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACACG	15	0.005784631	54.986588	1
GCCAACG	30	3.4746914E-5	45.854958	48
CGTCAAC	30	3.482047E-5	45.83855	53
ACGGGCT	30	3.4894154E-5	45.82216	16
GTGGTAT	675	0.0	45.211193	1
TTAAACG	50	8.278221E-9	43.99714	22
ATACCTC	25	7.848763E-4	43.99714	21
TGGTATC	705	0.0	42.49976	2
TGTCAAT	30	0.0019254391	36.657726	10
GCCCCGA	40	1.9005996E-4	34.36662	11
GCGGTAT	40	1.9005996E-4	34.36662	1
CGAATTA	40	1.9005996E-4	34.36662	15
TGCTTAA	95	7.094059E-11	31.834341	19
CCTAATT	35	0.0040885126	31.437775	54
ATCCGCT	35	0.0040885126	31.437775	42
GGATACC	35	0.0040992685	31.42091	19
CGTCCAT	35	0.0040992685	31.42091	29
CCAACGT	45	3.7778082E-4	30.569971	49
CCGAATT	45	3.79369E-4	30.548105	14
ACTTGAC	40	0.007838182	27.517899	46