EGAF00005412022 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412022
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95062
Sequences flagged as poor quality	0
Sequence length	91
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	200	0.2103890092781553	No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	199	0.20933706423176454	No Hit
CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGT	189	0.19881761376785678	No Hit
CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATGTCGTATGCCGT	153	0.1609475920977888	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	145	0.1525320317266626	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	131	0.13780480107719173	No Hit
ATATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	114	0.11992173528854852	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	105	0.11045422987103154	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACAAG	15	0.0010246681	85.04105	1
AGGTCGA	20	0.00320824	63.78079	2
TGGTATC	130	0.0	62.145386	2
GTGGTAT	100	0.0	55.27668	1
CAGGTCG	25	0.0077595618	51.024628	1
AAGTACG	70	1.8674837E-7	42.520527	1
GGTATCA	260	0.0	35.978905	1
TATCAAC	585	0.0	35.615482	2
ATGGTAT	60	1.58006E-4	35.433773	1
GTATCAA	485	0.0	35.068474	1
GTGTTGG	50	0.0027696267	34.01642	1
TCTTGGC	50	0.0027696267	34.01642	2
GTCGAGG	125	4.3473847E-10	33.998528	8
TCGAGGT	105	1.2183773E-7	32.37955	9
ATCAACG	695	0.0	29.9785	3
ATATCAA	130	2.3870598E-8	29.437286	1
CAACGCA	720	0.0	28.93758	5
TCAACGC	720	0.0	28.93758	4
AACGCAG	760	0.0	27.974031	6
AGTCGAG	145	6.8910595E-8	26.392052	7