EGAF00005412069 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412069
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	114851
Sequences flagged as poor quality	0
Sequence length	61
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	18705	16.28631879565698	No Hit
GTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1166	1.015228426395939	No Hit
GGTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	340	0.2960357332543905	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	241	0.2098370932773768	No Hit
TATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	234	0.20374223994566876	No Hit
ATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	212	0.18458698661744347	No Hit
GTATCAACGCAGAGTACGGGGACCATGCCGGCCAGAACCTGTTGGATCAACAACCCCAATC	162	0.14105231996238604	No Hit
GTATCAACGCAGAGTACGGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	139	0.12102637330105963	No Hit
GAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	127	0.11057805330384585	No Hit
GGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAA	123	0.10709527997144125	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATGTGT	15	0.0057431334	55.065853	1
ATATAAC	15	0.0057431334	55.065853	1
TATAACC	15	0.0057530557	55.041847	2
ATGTGTA	15	0.0057530557	55.041847	2
TTCAAAT	25	7.814347E-4	44.014294	12
GTGGTAT	510	0.0	36.710567	1
TCAAATT	30	0.0019153613	36.678577	13
TCAGAGT	30	0.0019153613	36.678577	9
CCAAGAC	30	0.0019153613	36.678577	3
AACTCAG	30	0.0019194656	36.6626	6
ACTCAGA	30	0.0019194656	36.6626	7
TGGTATC	535	0.0	35.494278	2
TGTATAA	55	8.5583997E-7	35.02663	2
ACGGGAC	65	8.290044E-8	33.8424	16
CGGGGTG	60	1.7009334E-6	32.079777	17
TCGACAT	35	0.004077925	31.43878	4
ATAACCA	35	0.004077925	31.43878	3
CTCAGAG	35	0.0040866365	31.425087	8
CTATCTC	35	0.0040866365	31.425087	46
CGACATT	35	0.0040866365	31.425087	5