EGAF00005412119 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412119
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	588910
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	3963	0.6729381399534734	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1756	0.2981779898456471	No Hit
GTATCAACGCAGAGTACGGGGTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1316	0.22346368715083798	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1315	0.2232938819174407	No Hit
GGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	785	0.13329710821687524	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	603	0.10239255573856786	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACAT	15	0.005756675	55.061565	1
CTTAACG	15	0.0057838405	54.996094	21
GTCCTCG	30	3.4661378E-5	45.884636	1
GTCGACC	25	7.856098E-4	43.996872	8
TACTTGC	45	1.8009268E-7	42.782005	35
GTGGTAT	2345	0.0	39.9167	1
TGGTATC	2445	0.0	38.35757	2
CGACGAG	110	0.0	37.49415	24
GGCATCG	130	0.0	35.958984	7
AACGAAG	40	1.9012157E-4	34.37256	6
TGACTCG	75	7.9871825E-9	33.00326	10
CGAGTCC	130	0.0	31.72582	27
GTTCATG	35	0.004075644	31.463749	1
CCGTTGA	35	0.004096043	31.431679	35
TATAGAC	35	0.004097746	31.429007	3
CTGCTTA	70	1.6076228E-7	31.426338	18
TGCTTAA	70	1.6076228E-7	31.426338	19
CAACGAA	35	0.0040994505	31.426338	5
CAATGCG	140	0.0	31.426338	19
ATGCAAC	35	0.0040994505	31.426338	21