EGAF00005412156 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412156
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	283053
Sequences flagged as poor quality	0
Sequence length	91
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	828	0.29252472151858483	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	776	0.2741536037420554	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	494	0.1745256188770301	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	419	0.14802881439165105	No Hit
ATATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	411	0.14520248857987728	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	371	0.13107085952100844	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	348	0.12294517281215886	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	301	0.10634050866798797	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	290	0.10245431067679904	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTACG	110	0.0	54.092705	1
GTGGTAT	525	0.0	42.906193	1
GCCGCGA	40	9.3059597E-4	42.501415	5
CGCCGCG	40	9.3059597E-4	42.501415	4
TGGTATC	595	0.0	40.715637	2
TACTAGG	65	5.545793E-6	39.232075	2
TACTATA	55	9.541711E-5	38.637646	2
GTATCAA	2010	0.0	38.272415	1
CGCGAGA	45	0.0016620997	37.77236	7
TATCAAC	2585	0.0	36.33583	2
ATATCAA	495	0.0	36.061806	1
GGTATCA	1040	0.0	35.55407	1
ATCAACG	2760	0.0	33.877937	3
TCAACGC	2825	0.0	33.098446	4
TCGAGGT	400	0.0	32.938595	9
CAACGCA	2850	0.0	32.80811	5
GTCGAGG	415	0.0	32.766384	8
AACGCAG	2845	0.0	32.716377	6
CCCACGT	55	0.0044416785	30.910118	9
CCGCGAG	55	0.0044416785	30.910118	1