EGAF00005412161 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412161
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	110358
Sequences flagged as poor quality	0
Sequence length	61
%GC	39

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2156	1.9536417840120335	No Hit
GTATCAACGCAGAGTACGGGGACCATGCCGGCCAGAACCTGTTGGATCAACAACCCCAATC	212	0.1921020678156545	No Hit
GTATCAACGCAGAGTACGGGAACCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	193	0.17488537305859114	No Hit
GTATCAACGCAGAGTACGGGGTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	160	0.14498269269106	No Hit
GTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	157	0.14226426720310265	No Hit
GGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAA	156	0.1413581253737835	No Hit
GTATCAACGCAGAGTACGGGCACGTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAA	137	0.12414143061672013	No Hit
GTATCAACGCAGAGTACGGGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAA	134	0.12142300512876275	No Hit
GGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCCGTACTCTGCGTTGATA	114	0.10330016854238025	No Hit
GGTTATACCTGCTTGCACGTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	113	0.10239402671306114	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	15	0.005772638	54.993202	17
CAGTCAA	15	0.005772638	54.993202	17
ACTCAGA	30	3.473133E-5	45.827667	7
TCAGAGT	35	8.623142E-5	39.280857	9
AACTCAG	45	8.779358E-6	36.662136	6
CTCAGAG	40	1.8918324E-4	34.370754	8
GTGGTAT	645	0.0	32.870083	1
TGGTATC	650	0.0	32.617233	2
CGGGTCG	35	0.00408621	31.424686	17
GGGGAGT	35	0.00408621	31.424686	18
CAGAAAT	35	0.00408621	31.424686	27
GGGTCGC	35	0.00408621	31.424686	18
GATCAGC	35	0.00408621	31.424686	15
CGTCAGA	35	0.00408621	31.424686	24
TCAACTC	45	3.7662653E-4	30.565628	4
GGGAGTG	45	3.776293E-4	30.551779	19
ACGGGCA	200	0.0	28.871433	16
CGGGGAA	115	2.0008883E-11	28.692104	17
CAGAGTA	1405	0.0	28.572983	10
AGAGTAC	1390	0.0	28.48569	11