EGAF00005412191 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412191
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	101337
Sequences flagged as poor quality	0
Sequence length	61
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	2223	2.1936706237603243	No Hit
GGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAA	278	0.27433217876984717	No Hit
ATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	181	0.17861195811993646	No Hit
GTCTCAGCTTACTGCAATCTCCGCCTTCCGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCT	167	0.1647966685415988	No Hit
GATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAA	148	0.14604734697099775	No Hit
GGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAAAAAAA	138	0.13617928298647086	No Hit
AACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	137	0.1351924765880182	No Hit
CTTCTGTACTTATGACGCCGATACCTTAAGCAAAGATCCGGCAGATGGTCGTAAAGTCAAA	120	0.1184167678143225	No Hit
AGATGGATTGGGGTTGTTGATCCAACAGGTTCTGGCCGGCATGGTCCCAAAAAAAAAAAAA	107	0.10558828463443756	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GATATAC	15	0.005716757	55.125187	1
TATACCA	15	0.005761688	55.016296	3
CAAGACT	15	0.0057729622	54.989143	28
GGCGTAG	30	3.422235E-5	45.937656	1
CGTAGCC	30	3.4624893E-5	45.846912	3
GCGTAGC	30	3.4624893E-5	45.846912	2
GTGGTAT	340	0.0	42.154556	1
AGCCCCG	35	8.6218766E-5	39.277958	6
TGGTATC	370	0.0	38.6601	2
AATCCCA	30	0.0019192159	36.659428	6
ATACGTG	45	8.776675E-6	36.659428	5
TATACGT	45	8.776675E-6	36.659428	4
TAATCCC	30	0.0019192159	36.659428	5
AGCGCCG	40	1.8860737E-4	34.385185	2
TAGCCCC	40	1.8915598E-4	34.368214	5
ACGTGCA	40	1.8915598E-4	34.368214	7
TATGTTG	40	1.8915598E-4	34.368214	5
TGCAAGC	40	1.8915598E-4	34.368214	10
ACGGGTT	35	0.0040861177	31.422365	15
TGGCCCG	35	0.0040861177	31.422365	29