EGAF00005412199 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412199
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57836
Sequences flagged as poor quality	0
Sequence length	61
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	1067	1.8448717062037485	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	176	0.30430873504391726	No Hit
GTATCAACGCAGAGTACGGGGTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA	171	0.2956636005256242	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	104	0.17981879798049658	No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATGATATGGCGCA	78	0.13486409848537242	No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGCTGGTCGTCTAC	72	0.1244899370634207	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCATAA	71	0.1227609101597621	No Hit
GTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	69	0.11930285635244485	No Hit
GGTATCAACGCAGAGTACGGGGTATAAGACGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAA	66	0.11411577564146899	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATAAACCAATGAGA	62	0.10719966802683449	No Hit
GGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	59	0.10201258731585865	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATCCCTACTCA	59	0.10201258731585865	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACGCTT	15	0.0057426915	55.032032	4
TCAGGAA	15	0.0057426915	55.032032	4
CGTGCGC	15	0.0057426915	55.032032	10
CAATGCG	25	1.175374E-5	54.98443	19
TTCCGAT	15	0.0057624145	54.98443	35
TCTGGAC	20	2.5964848E-4	54.98443	26
TCGGCAC	15	0.0057624145	54.98443	20
CGAAGTG	15	0.0057624145	54.98443	26
TAATTAG	25	1.175374E-5	54.98443	35
TCTTGCC	15	0.0057624145	54.98443	20
GAATTCT	20	2.5964848E-4	54.98443	22
ATGCAGT	15	0.0057624145	54.98443	40
CGATGCA	15	0.0057624145	54.98443	38
TCCGATG	15	0.0057624145	54.98443	36
CAGTGTC	15	0.0057624145	54.98443	43
GTCGGCA	15	0.0057624145	54.98443	19
GTCATCC	30	3.438074E-5	45.860027	13
CATCCAA	30	3.438074E-5	45.860027	15
CCAATGC	30	3.4557328E-5	45.820354	18
GAGTCCT	30	3.4557328E-5	45.820354	28