FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005412288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3115639
Sequences flagged as poor quality0
Sequence length91
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGT46620.14963222632660586No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT45060.14462522776226644No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36370.11673367806732424No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)