FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005412343

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412343
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1125
Sequences flagged as poor quality0
Sequence length61
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG272.4No Hit
GGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAATCATCAAGGAT90.8No Hit
ACACAGGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAATCATCA50.4444444444444444No Hit
GACACAGGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAATCATC50.4444444444444444No Hit
GTATCAACGCAGAGTACGGGATCGACACAGGGAATGAGAACGGAAAATCTCACTAAGGAAG40.35555555555555557No Hit
GGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCTGTCTCTTATACA30.26666666666666666No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.26666666666666666No Hit
GATCGACACAGGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAAT30.26666666666666666No Hit
CTCATTCCCTGTGTCGATCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTGACG30.26666666666666666No Hit
CATCAAATCCTTGATGATTGCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTC30.26666666666666666No Hit
TTTTTTTTGTGTTCTTGTTATGTTTTTTTGTATTGTTTTTGCTACCTGTCTCTTATACACA20.17777777777777778No Hit
TTTTTGGGGGATGCTCGCTCCAACCGACTGCTGTCACCTTCACCTGTCTCTTATACACATC20.17777777777777778No Hit
GTATCAACGCAGAGTACGGGAAAGAGTGTAGATCCTGTCTCTTATACACATCTGACGCTGC20.17777777777777778No Hit
TTCCAACATCAAATCCTTGATGATTGCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCC20.17777777777777778No Hit
ACAGGAGTACGGGAATACAAAAAATAACGAGATAATTAAAAGAGAAGAATACAGCTATTAC20.17777777777777778No Hit
CCTACAACCATCTGATCTTTGACAAACCTGACAAAAACAAGCAATGGCGAAAGGATTCCTT20.17777777777777778No Hit
GTTCTCATTCCCTGTGTCGATCCCGTACTCTGCGTTGATACCTGTCTCTTATACACATCTG20.17777777777777778No Hit
ATTCACTTCCCCTCGTTCGCCCCGTACCTGTCTCTTATACACATCTGACGCTGCCGACGAA20.17777777777777778No Hit
GATTTTCCGTTCTCATTCCCTGTGTCGATCCCGTACTCTGCGTTGATACCTGTCTCTTATA20.17777777777777778No Hit
GGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAATCATCCTGTCT20.17777777777777778No Hit
TCCTTGATGATTGCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTCATTCCCC20.17777777777777778No Hit
GCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTCATTCCCCTGTCTCTTATAC20.17777777777777778No Hit
TCCTTGATGATTGCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTCATTCCCT20.17777777777777778No Hit
GGTTATCCATTCCAACATCAAATCCTTGATGATTGCTCCATCGACTTCGTCTTCCTTAGTG20.17777777777777778No Hit
ACACAGGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAACTGTCT20.17777777777777778No Hit
ACACAGAAGTATTGGAATATTAACCAATTTCCCATCGACTACGCCTCCCCGTACTCCTGTC20.17777777777777778No Hit
TTCCAACATCAAATCCTTGATGATTGCTCCATCGACCTGTCTCTTATACACATCTGACGCT20.17777777777777778No Hit
CTTGATGATTGCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTCATTCCCCTG20.17777777777777778No Hit
GTGTATTAAATCTGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17777777777777778No Hit
ATCAAATCCTTGATGATTGCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTCA20.17777777777777778No Hit
GGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAATCACTGTCTCT20.17777777777777778No Hit
TGATTGCTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTCATTCCCCTGTCTCT20.17777777777777778No Hit
ATTCTTTTCTTCGCCTTCCCGTACTCTGCGTTGATACCCTGTCTCTTATACACATCTGACG20.17777777777777778No Hit
CACGCGGAGTGTACCCAGATGGCGAAAAAGCGAAGATTAACCTGTCCGAAGCAAATCCGAA20.17777777777777778No Hit
GAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAATCATCAAGGATTTGATGTT20.17777777777777778No Hit
CTCCATCGACTTCGTCTTCCTTAGTGAGATTTTCCGTTCTCATTCCCCTGTCTCTTATACA20.17777777777777778No Hit
ATCCGACACAACCAAAAGAAAACTAAAGGGCCCAACACCTGTCTCTTATACACATCTGACG20.17777777777777778No Hit
GAACAAATAAAAACTACAAAAAAAAAATAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.17777777777777778No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)