FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005412375

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412375
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91
Sequences flagged as poor quality0
Sequence length61
%GC30

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGGTGTGCTGCCCAGTGTGGCTTAGACTAAATGTTGAGTTTGGGTTTTTTGTTTTTTTTT11.098901098901099No Hit
ACCAACAAATAACTAGATGTGACAAATAATGTGGGCTGCATACCATGAAGCAAATTCAAGA11.098901098901099No Hit
ACGCTGAGTGGATGGATGTGTTTTGTTTTTTTAGAGTTTTGTTTTTTTTTTTTTTATTGGT11.098901098901099No Hit
GGGGTCTACGCGGAGAGGCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG11.098901098901099No Hit
TTGGTATCAACGCAGAGTCTAATTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAAAAAA11.098901098901099No Hit
GGCTTGCAAAACGTAACGGCCTGCAAATCCTGCAGCAGCAATGGTCAGTCCAACTGCTACC11.098901098901099No Hit
GGGTGGGGGGGGGGGGGGGCGGTGGGGGGGGGGGACGGGGGGGGGGGGGGGGGGGGGGGGG11.098901098901099No Hit
CTCATCATATGCTTATGGCAATAAGCACCTATAACAAGATCACCATGTTATCCCTCAAAAT11.098901098901099No Hit
CTCATAATGAACTCCACAATTGTGATACTATACTCACAATTCAACATAATCAATACCTACA11.098901098901099No Hit
TCCACATACTCACCAATAAAACCCATTAAATTATACACAAATGAAACATCCCAAAAAATCT11.098901098901099No Hit
GTATAAACGCAGAATACGGGATACAAAACAAAAAAAAAACTATATCTTATACACATCTGAA11.098901098901099No Hit
GTATAAACTCATCTACGCTTGTTATATTATTGTTTTTTTTTAATTTAACACCCTAATGTCT11.098901098901099No Hit
ATCAAAGCATAGTACGAAAAAAAAAAAAAAAAATAAAAAAAAAAAAGCGCATAACTGAGAG11.098901098901099No Hit
ATCCAAGCAGGGTCGCCGTTTTTGGGTGTGTTATGTTTTGTTTGTTTGTTTTGTGTTTTTG11.098901098901099No Hit
CGTCAACACCAAACAGCACGACACGCACAATCCTTCAGCTCTCAGATTCACAGAAGCAAAA11.098901098901099No Hit
GTATATTTTGGTTTAGTGGAAGTATAATTTTTGTTTTATTATATTTTTTAATTTTTTTTAT11.098901098901099No Hit
CATAAAACAAACAAACTCAACAAGAAACAAACCACACCACCAATACAAAATATAAAGCATA11.098901098901099No Hit
AGCCTACAACCTAACCAAAATACAAAAAAAAATAAACTTAACTCAATTCATCCACCAAAAA11.098901098901099No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAGTAGCG11.098901098901099No Hit
AGTTAGCAGTGATAGCTGCACAACACCGTGAATGTACTAAATACCATTGAATTGTACACTT11.098901098901099No Hit
ATCAACCAAACCTATAGAAAAAAAAAAAAAAAAAAACAACAAAAAAAAGCAAAAATAATCT11.098901098901099No Hit
TCAACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATATGATTA11.098901098901099No Hit
AATATGTGTGGAATGTTTTTTTAGTTATAATTTTATTTAACCACACTATATTCTGTATATT11.098901098901099No Hit
AATCAAAAAACTCCATTTAATTTTAAATCTAAAAGCAAATGAATTAATATACTTACACAAT11.098901098901099No Hit
GTAATACAATCTACTATGGATCATTATGAATTACAATAACATGAACCCATTCCATATCACT11.098901098901099No Hit
CCAATCCATCAAAACAACGAACAACATTAAACACCCATACAATGCGTTGATACCTCACTCT11.098901098901099No Hit
GCCCCGCACACGCTCCTTGAAGGCTAACAGCACGTCCAACAACCCCTCCAAGTACTGGCGA11.098901098901099No Hit
TGTTCATTATAATCTCAAAGGAGAAAAAAAACCTTGTAAAAAAAGCAAAAATGACAACAGA11.098901098901099No Hit
AATCACAGACGATCTATAATTATATATATATATATAATGAAAAAAAAATATCATAGAAAAA11.098901098901099No Hit
TTATAATATACAAACAAAGACACGAAGATATATTTAATTATTTTATATTTTTTTATTTTAA11.098901098901099No Hit
CTTGATCTACCAACAATCTCTCACGTAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.098901098901099No Hit
ATAAAAAAATAAACATCTACATAATCTTATTAATAATTATAAATAGATTGAAGACTACAAA11.098901098901099No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.098901098901099No Hit
AAAAAAACAAATAAGAAAAAATAAAACAAAAATTTACAGCACAAAAAAACATATAAAAATA11.098901098901099No Hit
ACGCAGAGTCGATAATTTTTTTTTATTTTTTTTTTTTTTTTTTTAAACAAGAGGGAAGACC11.098901098901099No Hit
GAAGAAGCACGCTGGAAAGTCGGCCAAGAAATACAAATAACAAGTTAACAAAACACTACTA11.098901098901099No Hit
GGTGGGTGTAATCAAGAACTATGATTATTCAGGATCTCTGTAGGAGTAAATGTATTACTTC11.098901098901099No Hit
TTACTCCCACCCAACATCTAAAAACACAATAATAACAAAACCAACATGCAATATCTTTCAA11.098901098901099No Hit
ACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGGTTTTTT11.098901098901099No Hit
GTATATACTGCTGACCGGGGCGCTGCAGTTCGGTTACTGTCTCCACGTAGGGACCATCCCC11.098901098901099No Hit
CAGCCGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.098901098901099No Hit
ATCGTATCAAAGCACAGTAGAATATTTTTTTTTTTTTTTAATTATATTTTAAAACCTAAAA11.098901098901099No Hit
GTACTATCAACCCATAATCGAGGTATTTTTTATATATTTTATTTTAATTGAAAAAAAAAAA11.098901098901099No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGATAAGCG11.098901098901099No Hit
AAACACAGAATACTCGAGATCAACAACATAAAAAAAAAAAACAAAGAAACACAAAACAAAA11.098901098901099No Hit
ACTCAAAACACAACATAGAATATAAGACACTCAATATATCACTATAAAACACACACTCTCA11.098901098901099No Hit
TGATTACACAAATTAAAGATATTAAAGCTGGTTCATGGTAACCTGTAATTATTAAATGAAA11.098901098901099No Hit
CAACAACCTCGCAGCCTTAGGCCCCACACACCATTATCAACCTACCAAACACATATCAACA11.098901098901099No Hit
ACCTTGAACACAAACATGAGTATAAGTCTCACACAAAAATCCTCTTAAATCAGTCTATTAT11.098901098901099No Hit
GTACAGCTGAGGTCTGCCTTGATGGTAAAGTTAATACAGAATTTGGAAGCTGACTATTTTT11.098901098901099No Hit
CTTAATTACAGTCGAATTATTATCAATCTAATACAAAAGCTAGCTACAAAACAACAAACAA11.098901098901099No Hit
GTCTTAACCAACAAGATTCGACCTTTATTTTATTTTTTTTTTTTTTATTTATATAATATAG11.098901098901099No Hit
CCTAATAAAGGCTCACGCCATTAAAAAAAAAACTTAACCAGACAAAATAACTACTATCAAT11.098901098901099No Hit
GGAGATGAGGGTGGGTATGCTCTTCTCCTCAGCACCCTCTCCAAGGCCCAGCCGCCCATAC11.098901098901099No Hit
CTAATACGCTGGTGTCTTCACAGTCCTTTTGGATTAAATGGGATCCCAGAGCCACTTCTTG11.098901098901099No Hit
CAAATACACAACAAAACAAAACAGAGAAGGCAAACCTGAAACACAAAAACATAACCGTAAA11.098901098901099No Hit
GAATTAAAGTGCTTAGAAAATCACCTTAGAATCAATTACAATGACTTAAATGAAGAGAAAA11.098901098901099No Hit
GTGGTATCAACGCAGACTCGAGAATATTTTTTTTTTTTTTTTTTTTTTTATCTTAAACACA11.098901098901099No Hit
CAACAGAATTGTCTCATACTCGAGAAAGTCTGGACTAAGATACAACCCATACACCCATAAC11.098901098901099No Hit
CAAAAAGCTCCACAAGGGCAGATATTTTTTTTTCTGCTTTTCCCACTGTTACCCTCCAGAA11.098901098901099No Hit
GCTCATTAAAATCACCTAAGGTAAATTATATTAATATTTATTAATATTAATTGGTATCCAA11.098901098901099No Hit
GACAATTGCGGTGCGAGTCATCAAAGCAGTGGACAAGAAGGCTGCTGGAGCTGGCAAGGTC11.098901098901099No Hit
CAACAATATCGAATAAATAAAACACTTGAAGTAGGGATTTCTAGAGAAGCTTTAAAATTTT11.098901098901099No Hit
CCCAGAATCAGTTACACTTAACAGAAACATGTCATATGACTGACTCTAAAAACCAAAACAA11.098901098901099No Hit
ATGGTATCAACAAAGACTAGACCATTATAAAAAATAGAAAGATAAATTAAAGAAAAAGGCA11.098901098901099No Hit
CGTATCAAAGCAGAGTCTAGTATTATTTTTATTTTTATTATTTTATATATGATAATATGTT11.098901098901099No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTAAACACCAAGGAAGGGGAA11.098901098901099No Hit
TCGTCAAGCATTGATGTAACCGCTGCTGTGCATATATCAAAAGAAATAAAAACATTAAAAC11.098901098901099No Hit
TTATAAAACCATACTCGCAGAATAATAAAATGATTACTAATTTATATTATACACATCTGAA11.098901098901099No Hit
ATTAAAACATTTATATCATCAATTAAATCAAAATATAAATCTTGTAATACACATAAATAAA11.098901098901099No Hit
ATGCAGAGGCCAACTTTAATATTTATTTATTTTTATTTATTTTTTTTTTTTATGTCTCTTA11.098901098901099No Hit
ATCCAGAAGTCAACAATACCAAGGATAAATTTCAAGGAAAAGAAGATGATGTTGATGAAGC11.098901098901099No Hit
CCTCATTCATCTCATCTTATAACTAATCAATTTTGAAATCACTACAAAAATAAAATCCACA11.098901098901099No Hit
ATAAAAAACATCTTCAGATTACAACTCATAAATATCTTTCACTCAAGTATCTAAACCAAAA11.098901098901099No Hit
CAATAAACTAACAGTCCATTAATTTAATTTATATTAATTATTATTAAATTCCAATGCATTC11.098901098901099No Hit
TTACAGTCAACTGCAAACAAGACATACCAAATTTATTATTTTTAATAGAAAACAGATTTAA11.098901098901099No Hit
GGCATACAGGCGCATGCCAGTAATCATCAAAAATAATAAGAAATAACAGTCATGAGAATCA11.098901098901099No Hit
GTTTAGTCAAAAAATAAACACAAAAAATATATTTTATCCTAGAGATCCAATAAATAGAAAC11.098901098901099No Hit
AATATATAATGTAAATATGGTATGGAAAATAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGG11.098901098901099No Hit
CCACACAAACCTGGTTTCAAGACAAAAAAATATACACAATGACTTTAACAAAAAAAAAAAA11.098901098901099No Hit
ATCAAATCCAACATCACATGAAAAATATCCAACAATCACTCTGGATTAATTATATACCAAG11.098901098901099No Hit
ACGCGGCGGCACGTCGAGAGTGATGGTGTTAGGTGTCAGGGTGTTGAAGAATATCTGGATG11.098901098901099No Hit
CTCCTTAAGAGCAACTAAGCTCACCACCACACCCTGACCATTATGTACACTATCACTCCTG11.098901098901099No Hit
CTGCTGTCCCAAAAGCCTGGCCATTAGAGGATAAACAAGACTCCTTTACAGGGTTAATAAA11.098901098901099No Hit
GTATAAGAGACAGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.098901098901099No Hit
CCATGATGTTCAGGCTGATCTCAAACTCTCAACCTCATGTGATCTACATCCCAAGGCCACC11.098901098901099No Hit
TACTCGCTCATATGCCTAAGCTTATATCTAAAAACAATCTATTAATTGAATTCAACCAAAC11.098901098901099No Hit
CATTAATACATGTTTTTGGTTATTTTTTCACAAAAATGAAAGAAAGTATGTTGGTTTCATA11.098901098901099No Hit
CATTCTGTGTAAAGACTTTTGTAATGTTCATGTTCAAATTATTTTATTCACATAATACGAT11.098901098901099No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAA11.098901098901099No Hit
CAAATCAACGCAGATTCAAGGTTTTTTATTTTTTATTTTTTAAATATTTTAATAATTAATT11.098901098901099No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACAAAGA50.055.014
ACAAACA50.055.010
ACACGAA50.055.020
AACAAAG50.055.013
TATACAA50.055.07
GATATAT50.055.027
AAACAAA50.055.012
TATAATA50.055.02
TTTTTTT50.055.048
TTTTTTA50.055.049
AATTATT50.055.036
TTTTTAT50.055.050
CGAAGAT50.055.023
GAAGATA50.055.024
CACGAAG50.055.021
TTATATT50.055.043
TTTTATT50.055.051
TTTTATA50.055.041
TTATAAT50.055.01
ATTATTT50.055.037