FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005412438

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412438
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138
Sequences flagged as poor quality0
Sequence length91
%GC35

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA21.4492753623188406No Hit
AAAAAAAAAAACTAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
CAAAAGAATACTACGTTTAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
GGTATCAACGCAGAGTACGGGGGAGAATTGCTTGAACCTGGAAGGTGGAG10.7246376811594203No Hit
CCATTCCATTCCATTCGATTGCAATCGTGTTGATTCCATTCCATTCCATT10.7246376811594203No Hit
GACAGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
AGTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAATT10.7246376811594203No Hit
GGACTACCCCGATGCATACACCACATGAAACATCCTATCATCTGTAGGCT10.7246376811594203No Hit
CTGAAAAAGTCCAAAAGACTAGTACACAAGGTACACCAACAAACACCATA10.7246376811594203No Hit
AACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCGTGACCC10.7246376811594203No Hit
ATGTACGGGAATTCTCAATGTCTATATGGTAGAAAAATGGAGGCTCTAGA10.7246376811594203No Hit
ACTAAGACGCCCGTGGGGATAGCGATGATTATGGTAGCGGAGGTGAAATA10.7246376811594203No Hit
ACTGGAGACAGCTATCTGACTCGATCTTTCGAACACTCTCCGAAACCTCA10.7246376811594203No Hit
GTTTAAACATGTAAAGTATTTAATAATTCATGTCAGTGATTATAATTATA10.7246376811594203No Hit
CATAAGAGCAGAATCAGCAACAAACTAATGAAGAAAGCGGTTATTTTCAC10.7246376811594203No Hit
GTGCAACCGCTGAATTTGGTTTATTTGTAACCCTAAAAGACTTATATGTG10.7246376811594203No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
GAGTACGGGAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAG10.7246376811594203No Hit
GTATAAATGCGAATAGCATTTTACTACTATGAGAACAAGTGCAGTCAGAA10.7246376811594203No Hit
ATACACATCTCCGAGCCCACGAGACGATCAGTATCGGGTTTGCCGGCGTG10.7246376811594203No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTA10.7246376811594203No Hit
GCATGAGGTGAAGCTGCCACGCGAGTGTGTGCTGGATTGTGTCTGTCTCT10.7246376811594203No Hit
CACTAAAAAAGACAAAAAATACACAACACCGAAACAACCAAACAAAAGAT10.7246376811594203No Hit
TTGCAAGTTGATACAATTCTAAAAAAAGTTTATTATTTACATGATAAAAC10.7246376811594203No Hit
GTCCTTTTTTTGTGGGTCTGGTGTCGTGTTCTTTGGGGCGGTTTGTGGGT10.7246376811594203No Hit
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTACTATGCAGT10.7246376811594203No Hit
AAAAATCTACAATCCCAAGACAACCAAACAAAAAGGATAATTTTACATCG10.7246376811594203No Hit
GGAATGGAATGGAATGGAATAGAATGGAAGGGAATTAACCCAAATAGATT10.7246376811594203No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCTGGGGTGGGGG10.7246376811594203No Hit
GTTTAAATGACTGTGCTGCCCCTTTCACATCAAAGAACTACTGACAACGA10.7246376811594203No Hit
GCCAATAACTTTCTGAAAGTTCTTAAAAATAAAAAATAGTAGAAAGAAAT10.7246376811594203No Hit
CTATAAAACTCAATTGATTGCGGTTACTGTACTTACTTCAATGGAACGTG10.7246376811594203No Hit
AAACATATTCCACGAATTAATAATATAATATTTATATATTAAGCAATCAT10.7246376811594203No Hit
ATGAACGCAGAGTCTACATATTTTTTTTATTTTTTAATTTTTTATAATTA10.7246376811594203No Hit
ATAGGAAGGGGATCTAGCTAGGGACCACGGCAATCCTGGCCATCCATCCA10.7246376811594203No Hit
TCTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGAAGCCCCCA10.7246376811594203No Hit
GGGTAGCATTTGTCTAACAAACTGCAGGGATTGAAATCAGTTTTTGTGGG10.7246376811594203No Hit
GTATCAACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA10.7246376811594203No Hit
AGCAAGGACTACCCCCTATACCTTCTGCATAATGAATTAACTAGAAATAA10.7246376811594203No Hit
ATATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
GCAAAGGGCAAGAACGGAAGTGGAGAGTAACGATGGGATACTTGAATTAA10.7246376811594203No Hit
AACGAAGACACACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAC10.7246376811594203No Hit
TAAAAAAAATAAAATTATCATATAGATAAATACCATAACTATAAACTTAA10.7246376811594203No Hit
GTATCAACGCAGAGTAACGCTCAGCCTAGTCCATATGATTCAGGGGATTG10.7246376811594203No Hit
AGCTGGGATTACGGTCATGTGCCACCACACCTGGCTAATTTTGTATTTTT10.7246376811594203No Hit
CTTATACACATCTCCGAGCCCACGAGACCGATCAGTATCGGGTGTGGCGT10.7246376811594203No Hit
TATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAA10.7246376811594203No Hit
GGTATCAACGCAGAGTACGGGGGAATGGAATGGAATGGAATGCAATGGAA10.7246376811594203No Hit
TCCCTAGGGGAAGAGGGAGAACAGTTCATCAAGGGAGCACCCCATGAGAC10.7246376811594203No Hit
CATTTTAAAAGATCGCCTTCAAATTATTTTAATCACCTACAACTTTTAAA10.7246376811594203No Hit
ATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCGCTTATACACATCT10.7246376811594203No Hit
GTATTGATTATTTTAACAATTATGTTGTAGGTAAATGATATTAACTAAGA10.7246376811594203No Hit
TTCCAGAGATGGATTGGTGCCTTCGGGAACTTACATACAGGTGCTGCATG10.7246376811594203No Hit
AATCCATTCCATTCCATGCAATTCCACTCGGGTTGATTTCATTCCTTTCC10.7246376811594203No Hit
ATGTAAAAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAA10.7246376811594203No Hit
ATCAAGGAAATAACAGAAGCATTCTTTACTCAGACTAATGAAAGACATTG10.7246376811594203No Hit
AATCATACACGACCCTAATTAATTAAAAATTGATTATGCTACCTTTGCAC10.7246376811594203No Hit
GTCCCTTACTGGTCCTGCTTCCATGAGTAGCCGTGACCAGGGGAAAAGGG10.7246376811594203No Hit
CCCAGTAGTTCTTCTTCAAGGAAAAATTCTCAGTGGAGTAACAGAAGCCT10.7246376811594203No Hit
TATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTAACCA10.7246376811594203No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
GTATAAAAGAAAATAACGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT10.7246376811594203No Hit
ATAAAAAATAAAATTAAGTCTACAAATTAGAAGAAAAAGAAAAAAAAAAA10.7246376811594203No Hit
CACTAATACACATCTCAGAGCCCACTAGACGCTCATCACTCTGCATAGCC10.7246376811594203No Hit
TCTCAGTACCCTTAGGAAAAGAAATCAATTGAGATTCCCTCAGTAGCGGC10.7246376811594203No Hit
GTTGGGGGAAATGTCCATAGTCATTACTCAGTCAAAACTTGTGTTCTCAT10.7246376811594203No Hit
ATATAACAAACATTACATTTCTAAAGAAAGCAAAAATACAATCCCCCCCA10.7246376811594203No Hit
GGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTGTTGTA10.7246376811594203No Hit
GGTTTAAAATGTTGATAGTTTTAGCTTAATGCTCTAATGGAGAAAGCAAA10.7246376811594203No Hit
ACAGGGTGACTGGAGTTCAGACTGTGCTCTTCCGATCTCCCGTACTCCTG10.7246376811594203TruSeq Adapter, Index 12 (95% over 22bp)
ATCAACGAAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
AATAAAACCAGATTACCACAAAAAAAAAAAAAAAAAAAAAAAAAAATTCA10.7246376811594203No Hit
TGTACAGCCAGAGCCAGTGCTGAATGAAGACAAAGATGAATTTAAAGGGC10.7246376811594203No Hit
AATATACACATCTCATAAACCAACTACCATACAACAACAAGTAATCCATC10.7246376811594203No Hit
GTTTCGGTTGTTTTCTATTAGACTATGGTGAGCTCAGGTGATTGATACTC10.7246376811594203No Hit
CAACCACACAAAAAAAAAAAAAAAAAAAAAAAAAGTGCACGCAGGGCGTC10.7246376811594203No Hit
GTCCATCCAGAGTCCTCGTCCAGGTCAGGTCCTTCGTGCTCCCCGTGGAG10.7246376811594203No Hit
GACTGGAATGGAATGGAATCAACTCGATTGCAATGGAATGGAATGGAATG10.7246376811594203No Hit
ATGTACTGTAAATATGACAGTGGTCTAATAATATTAAAATATAATATTTT10.7246376811594203No Hit
GTTCTAAATAGAGCTGTTTGGAGGATGTTCTCTGCGCTCCCAGGCCGGCA10.7246376811594203No Hit
CCGTTGACCTCCTGCGTGCAAAGCAGGCGCTCTACCAACTAAGCTCTGTC10.7246376811594203No Hit
GAATCAACGCAGAGTCGACGTTTATTATTATTTTTTTTTATTTTTATTAT10.7246376811594203No Hit
AAAAGTATGTTTTTATCTTCTAATTTCCCTATCTTCTCTATTCTTTTCTT10.7246376811594203No Hit
AAACCCATACTAAAATAAAAACTAAAACCAAAACAAACAAAACCCATACA10.7246376811594203No Hit
GATCTGGACCTTGATCGGGACCGGGACCTCTGGCGATCCACAGATGCTGG10.7246376811594203No Hit
GGGTTGGATCATTGGCCTGACGTTTGCAAATTGAGGAACCTTAGTGCAAA10.7246376811594203No Hit
AATATAAACATCTAATATCACAAAATAAAAACGAAAAAAAATTAATATCT10.7246376811594203No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA10.7246376811594203No Hit
AAAAAAAATAAAAAAAAATAAAAAAAACATAATAAAAACAAAAAAAAAAA10.7246376811594203No Hit
TAGTAAAATAAACATCAAACAAACAATATTAAGCCAAAAAAAAAAAAAAA10.7246376811594203No Hit
GGCCGGGAGACCAGCCCTCGTGGCCAGCCGCTGTGCCCTCCAACCCCAGG10.7246376811594203No Hit
GTCAGTCACGGAGCAAAAGGAATGTCTGACAAACATATGACTGTCTCTTA10.7246376811594203No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
GAAATTGGTAATCGATACATCGAGATATTTCCAAGCAGAAGGAATGAAGT10.7246376811594203No Hit
ATAAAATAAAAAATTAAAAAAAAATAGAAAATGGAAAAAAAAAAAAAAAA10.7246376811594203No Hit
ATCTTGACCTACGTGGCTTGGAAGATAAGTGGTTTTCCCAAAAACCGTGT10.7246376811594203No Hit
ACTTATGACAGCTCGTGAACAAGGCGTAGTTAAATGGTTAAACGACACTA10.7246376811594203No Hit
TTACCAAACAGTGTGATAATCTTGGTAAACAGGATAAGCTAGACCACAAA10.7246376811594203No Hit
GCTCCTGGACTTAAGTGATCTTCCTGCCTTGGCATCCCAAAGTGCTGAGA10.7246376811594203No Hit
GATGATATTACTGAAGGGTGGAGAACAGAAGGGTCATGACAAAATATCTG10.7246376811594203No Hit
ACCCTAACTCTCTAAAGCAGAACCAAGAGGAAAAGCATGGGAGTATACCA10.7246376811594203No Hit
CATTAGTATTGCTCAGGTGGTTGTCCTCAGACATCTGTGCATTCTGGAAG10.7246376811594203No Hit
ATCCAGCACAGATAAGCTGGGTGGTAATGATAATAAAAATGGTTTTCTCA10.7246376811594203No Hit
GAAGATTAGTCCGCCGTAGTCGGTGTACTCGTAGGTTCAGTACCATTGGT10.7246376811594203No Hit
GAACTATCCTGCCCGCCATCATCCTAGTCCTGTCTCTTATACACATCTCC10.7246376811594203No Hit
CTTGTGGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCG10.7246376811594203No Hit
CAATTGGAATGGAATGGAATCGAATGGAATCGAAAGGAATGGAATCGAAC10.7246376811594203No Hit
GAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTAATTAT10.7246376811594203No Hit
CTTCACAAGCCAGCCAGAACTCAATATTCTCCTCACTGAATTCAGACTTT10.7246376811594203No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTAG10.7246376811594203No Hit
ATGTTGAGGCTGTTCTTGCACTCCTTCCATCAGGTGCTCCGCCCACCTCG10.7246376811594203No Hit
TAAATCCCCTCACAGGGCTTCATATCCCCGAAATCTGGGATATTATGGCA10.7246376811594203No Hit
TATACACATCTCCGAGCCCACGAGACTACGCTGCATCGGGGTTGCCGTGG10.7246376811594203No Hit
GGCAAGACCATCACCCTTGAGGTCGAGCCCAGTGACACCTGTCTCTTATA10.7246376811594203No Hit
TGCCTGCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCC10.7246376811594203No Hit
CAACTCCCTCTTTCTGGAGTGAAGCATCCGAAGGAATGCTTGAAGTACCC10.7246376811594203No Hit
AGGATGGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
ATCTAACTCCTGTCAGATAAAATGATTAAGTTTTCAAGAGGCAGGTTATA10.7246376811594203No Hit
ACTGAGAAGTTTAAATTGTTAACAAAATGCATTTTTCTTCTGGACATTTT10.7246376811594203No Hit
CAGTAATGCAATCCACTATTTCTTCAGCAGCTTCAGCATTATTAAGACAG10.7246376811594203No Hit
CACAAGCATTGAAGGATGGGCTGTGCTGGCCACAGTCATACAAGTTCAGC10.7246376811594203No Hit
GTGGTATCAACGCAGAGTCGACTGTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
TATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
CCTCTACTAAGAACCAAAAAACCCACCAGCACACAAACCAATTCCACTTC10.7246376811594203No Hit
CTCCAGCATCTTGTCACACTCGTCCAGCACAAAGTGCTTCACATTCTTTA10.7246376811594203No Hit
GTTATATCCATAAGCAATAGCTGCATCTTCTACAATATCACATGCATGGA10.7246376811594203No Hit
CTGGTATCAACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
CTTCAATGGTGCGTCTATTTTTGGGAGCTGCCATCCAAAAGATACTGTCC10.7246376811594203No Hit
CATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCTGT10.7246376811594203No Hit
CCCTCAAACTACTCTTAGCCTCAAGCAATCCTCACGTCTCAGCCTCCTGA10.7246376811594203No Hit
TCTGATTACCTTGAATTGGATACAATTAAAAATCTCGTCAAAAAATATTC10.7246376811594203No Hit
ACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7246376811594203No Hit
GAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGCAATG10.7246376811594203No Hit
ATTCTTGGAGGTCTTATAGGTGCACTTTCCACTTTTTTTATTACAAAACT10.7246376811594203No Hit
CAAAATTAAAAACACAGAATTTACAAATATAATTATTATTATAGATTTTA10.7246376811594203No Hit
CAATTAATCTTTCCATATTCGTCTGCGTTTAGTAAATGCGTTAACTAGGC10.7246376811594203No Hit
ATATAAACCAACATTAACATAAAAAAATAAAACAAAAAAAAAAAAAAAAA10.7246376811594203No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers