FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005412439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138
Sequences flagged as poor quality0
Sequence length61
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACCCACAATCCACCACACACTCCCGTGGAATCTTCACCTAATGCCTCAATCATATACAC10.7246376811594203No Hit
CAAAAAAAACAGTTTAATACACACGAAAAAAACAACAAATCAATAAAAAAACCCTGCTCTA10.7246376811594203No Hit
GGCTTACACCAGCTCCCATCCCTCCAACATGGAGAACTTGGGGTTGTCTCCATGATCCTTC10.7246376811594203No Hit
GTATTAGGCCAGATGGCTGCCTTCGCCATCGGTATTCCTCCAGATCTCTACGCATTTCACC10.7246376811594203No Hit
CAGACGCACATACCACAGATTTAATATAAAAAAAAAATAACAAAAAAACCAAAACCCAAAT10.7246376811594203No Hit
GGGGTTCCTGGTCAGACACCAGTACTACCACGGGCAGCGTTTTTTCCGGCAAGCTCTGGTA10.7246376811594203No Hit
GTTAACCATAATAATTCCAAAAGTATTGATAAATGAATTTAATTCCAAGTCACCATTCCAT10.7246376811594203No Hit
TCGCCGTGGTCTGCGGCCCGGGGAGTGCTTCGAAACTACTGGGAGCGACTGCTACGGAAGC10.7246376811594203No Hit
GTCCTTAGTTACGAGTGCCTGAGAGACAGAAACTAGAGCACTCGACTATGCTAAATAAGTA10.7246376811594203No Hit
CAAAGAGAATCTAGAAAAAAATAAATAATTAAAATTTAAATTTAAAATATAAAAAATAATA10.7246376811594203No Hit
GTCCTAATCACACCAGTCCTACTTCTAATATCTCTCCAAGTCCTAGCTGCTGGCATCACTA10.7246376811594203No Hit
GCACAGGGAGTTTAAAGAGGCATCGATCAGAGAGGGCGTGAGTATAGCGATAAATGGGAGT10.7246376811594203No Hit
CACAAACTAGCAATAAATAATATATATAAATTTTTATAAAAATTATAATATAAATAAAACA10.7246376811594203No Hit
GCGGGGAAGCGTATACCTAATCTGGGAGCCTGCAAGTGACAACAGCCTTTGCGGTCCTTAG10.7246376811594203No Hit
TCGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAG10.7246376811594203No Hit
AGCTAGCTCTCTGGACTAAAATTCAGGTAAAATTCAATGTAGAGATGTTCATTTTGTTTTT10.7246376811594203No Hit
ATTCAATTCCTGAAGATTCCATTCCATTCCATTCCATTCCATTCCTTTCCGTTCCATTCAA10.7246376811594203No Hit
CAAGCTAATGTACAGCAAAATGTGGAAACTACTGCTAAAGAAAATTATGTCTTCAAAGATT10.7246376811594203No Hit
CTTTTCATGTGTTTGCCATGTAACAAATATCCTTAACACCTCCTTAACAATTCTGAAATGC10.7246376811594203No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG10.7246376811594203No Hit
TATAAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
TAACACCTGACATTAGTAAGAGTTTTTTTTTTATTTTTTAATCCATATTCCTTCTATAAAA10.7246376811594203No Hit
GAGTACGGGAGATCGGAAGAGCACAGTCTGAACTCCAGTCACCCTGTCTGTCTCTTATACA10.7246376811594203TruSeq Adapter, Index 12 (95% over 22bp)
ATCGAAACCAATAAGACAACAGATTAATTAAAAAAATAAATAAAAAAACATCAGAAAAAAA10.7246376811594203No Hit
CCCTAATAATCGGTGCCCCCGATATGGCGTTTCCCCGCATAAACAACATAAGCTTCTGACT10.7246376811594203No Hit
TCTCCACTCCAAAGTTAGACAAAATGCCAGGAATGTTCTTCTCTGCTAACCCAAAGGAATT10.7246376811594203No Hit
AAACTGAACAGACTCATACTGAACTGAATAATGTGGCCAGAAGAAACACAATGGTAAGTAT10.7246376811594203No Hit
CTATATATAGATTAAGCTTTCAGGGATTTGGAAATCTTTTTTTATTTCTCTTTTTTTGTTT10.7246376811594203No Hit
CCTGAAAGGCCAGATATTTATGGGACTTAGGCAGGAGGATCAATAGAGCCCAACATCTTGA10.7246376811594203No Hit
ACGCCACCCAGCTGAGTGTTGGGCGGTTAGTAGCGCGGGGGGTTCGCGGATCGTCTGTTGG10.7246376811594203No Hit
GTTTATAATATAAAAATATAATAAAAAAATACTTTAAAATAAATTTAAAAATTAAAAATTA10.7246376811594203No Hit
CAACTGAGTCACGGCTAAAATCATCACTCATCTAAAACTTAAACCAATTCTTACAAATAAT10.7246376811594203No Hit
TCCTAACACTCACAACAAAACTAACTAATACTAACATCTCAGACGCTCAGGAAATAGAAAC10.7246376811594203No Hit
GAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTGTCGGGAGTTCAAGTTGAAAATAAAGA10.7246376811594203No Hit
CGGTATTGACTGTAGTATAGTTAACTGGCCTTAAAAAGGGTGGTGGGGAGGGGATTTCTAG10.7246376811594203No Hit
CTGTTCCTCCTGAGTGTCAAGTTGCTTATATGCAGAAAGGATGGGTGATAGTTCTTGCTTC10.7246376811594203No Hit
ATTACGCTGTTAATAAGCTTGGATCTCCATCCTGCAAGGCAGCAAATATTTATATCAAATA10.7246376811594203No Hit
GTCCAATGAAAGCAGAGTCGAAATTTTATTTTTATTTTTTTTTATTTATTTTTTAAGATAA10.7246376811594203No Hit
GTTCCATTCCATTCCATTCCATTCTATTACATTCCCTTCCATTCCATTCCATTTCATTCCA10.7246376811594203No Hit
CTGATGCCCAGGCAGGAGTGCACTGCAACAATATCCCAACACAGCAACCTCAACCTAACAC10.7246376811594203No Hit
GACGCAGGCAGAATTGCGTCATATAAAGACAAGATAACGAATTTACTAAACGCAGACGAAA10.7246376811594203No Hit
ATAAACGCAGAGTACTGGGAAAAGAACCCCTGTGACGACAGAGACTCACTCTTATACACAT10.7246376811594203No Hit
ATCTTGAATTATGCCAACTCCAGACTTCTCCTTCTTTTTTGCACTTTGGCTCTTGAAACTC10.7246376811594203No Hit
CCCTTTTTTCGTCTGAAGAAGCTGACGTCCGAGCTGGGACAGCAGCTTCTTCACAAAATAA10.7246376811594203No Hit
GTAATTAGGTAGCTCCTCTCGTTACGGGGGTAATAAAATTGGCTCTCCAAACAAAGTTATT10.7246376811594203No Hit
GCTCGACCCACAACTCCATTTACTCATAATCATTACCTCCCTAGTGCCCTACTCCACACTC10.7246376811594203No Hit
ATTGGGAGTGGTAGTATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACAGGAA10.7246376811594203No Hit
AATCAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATAAAAAT10.7246376811594203No Hit
GGCACCTCCTTAGGCAATTCTATTTCCTTCTCAATTTAAAAATATGTCATGGGTTGAATAT10.7246376811594203No Hit
GCTTGGTTTTACTCTAGATTTCACTGTCGTCCCACCCCACTTCTTCCACCCCACTTCTTCC10.7246376811594203No Hit
GTGATAGCAATCACATTGAGATTGAAATCCATCAAACCAGAACTCACATTATCCATGCATA10.7246376811594203No Hit
CCCTTTGTACCCACCAATTTAGCACGTGTGTAGCCCTGCTCCAAATGGCCATGATGACTTA10.7246376811594203No Hit
CAAAGGGTGTATCAGGTACTCTTAGTTGATACAGGGCTGGTAGACTCGTAGGCCGATGCGC10.7246376811594203No Hit
TCATATTAATATCAGACATTCCTTTTTCTAATTTAATGAAATGTATATTATACACATCTGA10.7246376811594203No Hit
CAACCCAACCAAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
GTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCTGTCTCTTATACACATCTGACG10.7246376811594203No Hit
GAAGAGAGAGCAGGTGGTAGAAATTGATGACACTCGATGCCGGCCTGGGAGCGCAGAGAAC10.7246376811594203No Hit
TCCAATATACGAGCTTTTAAATAATTATGTTTTATTGAATGTTGGATTAGGACAACAATAT10.7246376811594203No Hit
GTATCAACGCAGAGTACGGAAGATTCCATTCCATTGCATTCCATTCCATTCCATTCCCCTG10.7246376811594203No Hit
GTATAAGCTCAGAGGCGGAGGTATTGTTGATGTTTTGTGTGATGGTTGTGTATTTTATGTT10.7246376811594203No Hit
GTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAGATAAAAAAAAAAA10.7246376811594203No Hit
GAGTAATAGGACGACCAATTACTAAATGAGTAGAACCGTCAAGAATGGCCTGCTTAGGCGT10.7246376811594203No Hit
AACATAAAACAGTATAATTATTAATTAAAATATAAAATTTTTCTAAAACATGACGGATGTT10.7246376811594203No Hit
TACGTCATCACCGCCTGCGCGTTGGATAAATCCGAAGCCTTTAGTGTCGTTGAACCATTTA10.7246376811594203No Hit
GGAAAGCATACAACCACAATAAAATCAAAAAAAAACAAAACAACCCAAATAGAATAGCATA10.7246376811594203No Hit
GTACGGGTATTATGAATTGAAGTAGCAAGATTTTTTGAGGCATGCTTGTACTTGAGCTGTA10.7246376811594203No Hit
GTAACACATCATACTACTTCCAACAAAAATTCATAACACACATCAATCCCAAGACTAATAC10.7246376811594203No Hit
CCATTCCATTCCATTCGATTAAATTCCATTCCATTCCATTCCATTGCAATCGAGTTGATTC10.7246376811594203No Hit
TAATAATAACATAAAATACAATAGAAATAGAAATTAAAAGAATGGAAAAAAACAAACAAAC10.7246376811594203No Hit
CCGTGAGCCCGTGTCCCGGGCAGGCCGTTGGAGGCCGCCGCTACCCACTAACCGTGGTGGA10.7246376811594203No Hit
GTATAAACGCAGAGTCGAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATAAAA10.7246376811594203No Hit
GAAGTGGAATTCGTTTGTGTGCTGGTGGTGTTTTTTGATCTTAGTAGAGGCTCTCTCTTAT10.7246376811594203No Hit
GGCCTTCGATACGGGATAATCCTATTTATTACCTCAGAAGTTTTTTTCTTCGCAGGATTTT10.7246376811594203No Hit
ATAAAAAACTAGTAATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
GTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCT10.7246376811594203No Hit
GCATTACACAGAGCAGATCCTCAAGCATCTGCCAGAAATTAGAGTAAAAGCAGTCATGTTA10.7246376811594203No Hit
GTATAACCGCAGAGTCCAGATTAAATTAATAATGTTATTATTATGAACCCACGATGCAGAG10.7246376811594203No Hit
TATATAACCTCCGTCTAGCAAGTTTATAAAAATAATTGTTATTATTTGTCCTCCCGTGAGG10.7246376811594203No Hit
CACACACACACACACAAAAAACACGTAATAAATCTAGAATGGTCCTTAGGCTCATGAGAAC10.7246376811594203No Hit
TGCAAAAGCATATAGCATATTAAATTAATAATACAAAAACTCACAAAGAGATTTAATAATT10.7246376811594203No Hit
GTTGTTGTGGATTATTGGGTTTGTATGTTTTATTTATTAATGTATTAATTTAGTTTGTTGC10.7246376811594203No Hit
GACACAAGAGCAAGAAACACAAGCTTTTGTAGAGGAACCTAGTAAAAAGGGAGCACTTAAG10.7246376811594203No Hit
CAAGAACCCAACACAGGAGGATCATTTGAGCCCAGCAGATCAAAGCTACAATAAACAATGA10.7246376811594203No Hit
CCACAGACCACGCAAAGTCGCGGTGTCAGTTGAGGATGGTTTCAGGATGAAACTCTACCAC10.7246376811594203No Hit
ACAGGTGAGTGCCCCTCCTCCTAATAAGTGCAAAAGCCCAATGAATGCCTTCAGGCTTTTT10.7246376811594203No Hit
GAATAGGAGCTTCAGCCTAAAGAATGTGAAGCACTTTGTGCTGGACGAGTGTGACAAGATG10.7246376811594203No Hit
AATACAAACATTGCTTTAAACCGTTTATAATAAGATAGGCTTCTCTTGCATTCGAATTGAA10.7246376811594203No Hit
AAAAACCAAAGAAAAAAAAAAAAAATAAAAAAAAAAAAATAACACAACCACAAAAACAACT10.7246376811594203No Hit
TATAAAAGAAGAGTACTGGATAAATAAAGAAAGACAATACAGACTCACAACCATAAAAGAC10.7246376811594203No Hit
GAAACAGCTGAATAAATTTAAAATTGTTATTATAATTAAAGATATTCATATTTTTACTACA10.7246376811594203No Hit
GTAAAAAACAAATCAACTATAGAAAAAAAAAAAAAAAAAAAAAAAAAATAAAATAAATAAT10.7246376811594203No Hit
AGGTATTGTTGTTGTTGATTGATTTTTATGCTTTATCTATGGTTTCGTTTTAGTTATAAAT10.7246376811594203No Hit
TTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAACAATTTGG10.7246376811594203No Hit
TGGAATCAGGGGCCTCTGCTATCTACCCAGTTCCCTAGCTCTGTCAATACAATATACCCCA10.7246376811594203No Hit
ATCTCGGACTCGGGGCTGCTGTTCAGATTATTTAGTCTCATGAGGTGCTACATTGATGAAC10.7246376811594203No Hit
CGGTATGACTTGTGGGCCAGATTTTGCCGCGAGCTCTGCTGTGCAATGAGAGTGTTCATTG10.7246376811594203No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.7246376811594203No Hit
GACTAGGATGATGGCGGGCAGGATAGTTCCTGTCTCTTATACACATCTGACGCTGCCGACG10.7246376811594203No Hit
GGCTGAGACTGAACCCCACGAGCAGGGACTGCTCTTCTGCCTCCCGGAGGCCCAGCCGCGG10.7246376811594203No Hit
GTGATACCCCGCCTGTACAAAACAATTGAAAATTAGCCAGGTGTCGTGGCATCTGCCTGTA10.7246376811594203No Hit
GTATCAACGCAGAGTACGGGGGAAAACAAAAAAGAAAAAAGCAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
GGCGGGGTCTGGGGGGCGGCTTCGGCGGCGCCGGGTGCGGGGGTCAGCGCGGCGGGGGTGG10.7246376811594203No Hit
CATCTTATATATATAAAAAATAAGAAATACCAGATAAAAAGAGAAAAGACATAAAGATCAT10.7246376811594203No Hit
GAGTAGCATGAGGAAGGATAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAG10.7246376811594203No Hit
GGGCGGGGCGGGGCGTGCCCGTGGGGTGGTTTGGGGTGGGTTGGGTTGGGGGGGGGGGGCG10.7246376811594203No Hit
GGGGCGGGCGGGGCCCTACCAACCAGACACCCCCCACCCACCACGACGAACACTACACAGG10.7246376811594203No Hit
ATCCAGATCTGTTCTACTGAAGAATTATAAAACAATTTCACATTCAGTCTCCCAAAGTCCC10.7246376811594203No Hit
TTAAAATGCCTGTCATTAAATATGAGCAAAGCCCCAGAAATAGTGATTACAAACCGGGCTG10.7246376811594203No Hit
AGCACAGAGAGTTCTCCCAGTAGGTTAATAGTGGGGGGTAAGGCGAGGTTAGCGAGGCTTG10.7246376811594203No Hit
ACAGGTACGGGATAACAAGCCAAAACCAACAAAAAAAAAAATACCCACAAACCGCCCCAAA10.7246376811594203No Hit
GTATCTACGGGGACGCGGGGAAAGTTAGTGTTTTTGATTTATTTTTTGTTTATTTGAGAAA10.7246376811594203No Hit
GAAGGTGAGGGTGGTCATGCGCTCCGGCAGGCGCGGGATGCGGCTGAAGCATAGCATGAAG10.7246376811594203No Hit
CAGACAGACTACAGCTAAAAACAAAAAAAAATAAAGAGCCAAAAATACCAACAAAAATAAA10.7246376811594203No Hit
TGCACTAACAAAACATATTTTCTAGGTGTAAACGAAAAATCACATCGCTTTTAAGGTTAAC10.7246376811594203No Hit
ACTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAGATATCGGTGTTCTAAGAATAAT10.7246376811594203No Hit
AGCTTAGTTGGTAGAGCGCCTGCTTTGCACGCAGGAGGTCAACGGCTGTCTCTTATACACA10.7246376811594203No Hit
CTTTCAATGAGAATAGATAAATAAAATTAAATAAATACTGGGACAGAGCGAGACTACATTA10.7246376811594203No Hit
AGGTTTATGGAGGGTTCTTCTACTATTAGGACTTTTCGCTTCGAAGCGAAGGCTTCTCAAA10.7246376811594203No Hit
AAGAGAGAGACCCTGTGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7246376811594203No Hit
GCATTCCCACTGTCAGATTCAAATTTAACTTTAACAGGACGTTCAGAAAAAACTTCTTCTT10.7246376811594203No Hit
GCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTCGAAATCCATGAAGCA10.7246376811594203No Hit
GTATTACAGCCACCTACTGCCCAGTAACAAATAAATAACAACCACAATAAACTAACCGTGC10.7246376811594203No Hit
CCCCCTTTCCCTCCCCTTCAAGCACCGCTTGAGATTTGGGCTTTATTATTAAGAGCTGCTA10.7246376811594203No Hit
AAGGAGGGTAGACTGCGTGATGATTGTGTGTGTATGATTGGAGCTGGGTGTTGTGAGGAGT10.7246376811594203No Hit
GAGGAAGGATCGATTTGGGATTGTCACAAGTTCAGATGGAACTGGAACCACAGAGGATACA10.7246376811594203No Hit
GGTATCAACGCTGAGTACGGGGAGCAACCTTGTCTCTACCAAAAATACAAAATTAGCCAGG10.7246376811594203No Hit
CCTCATAAGCACTCTCAACCACCTGCTTGTGAACCTCTTTCCACTGTTCCTTATCTTTATC10.7246376811594203No Hit
GTAAAAACGAACATAGACAAGAGGAAAAAAATAAAAAAAAAAAAAAAAAAACAACAAATTA10.7246376811594203No Hit
TCCATGGGCTCCTCAACAGTTTCAGTCTTGCTGCTCCATACATAACTAGGAATGTTTATGA10.7246376811594203No Hit
ATCAACGCAGAGTACGTGCGACACAAGCCATAAACACAAGGCCCAGGAGAAAACCAAAATA10.7246376811594203No Hit
CTGTTGTTGAAGGCGTTTGCACATGCAAAGTCAGATTTGTTGCTCCAGTCCACAGCACTGT10.7246376811594203No Hit
GAAAAAAATCTTAGAGAAGTTAAACGGTAAATTTCAGCACCAAAAGTGCAAACTGAGCCAT10.7246376811594203No Hit
GATATAAATGGACTCAAAAAAACAAAAACAAAAACAAAAAAAGAATAAAAAGCATATGAGT10.7246376811594203No Hit
ATACTAGTGTGTGAGAGAGGTAGGTCGTAGCCATCCGCATCCCATGCTCCGATTAATTTTT10.7246376811594203No Hit
GAGAAGAAACCTACCTCATTACCGTGAAATGAGGATACACTAAGCCAATAAAAACAAATCA10.7246376811594203No Hit
GGGGCTCGGGCATAAGCGGGGGATTTTGTATCTGTGTGTTTTAGAGTTGTGAGGCTGCAGG10.7246376811594203No Hit
GCATTTATATCGATAGTTCCATTTGCAGGTAACCCCCTTATTTGATTGCTGAGGGCTGTTG10.7246376811594203No Hit
TCCCTGTGCCGGCTGGTTCCTCTCCCTTTTCCCCTGGTCACGGCTACTCATGGAAGCAGGA10.7246376811594203No Hit

[OK]Adapter Content

Adapter graph