EGAF00005412552 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412552
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1090530
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGT	3027	0.27757145608098815	No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3018	0.27674616929382956	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2673	0.24511017578608568	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1843	0.16900039430368718	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1511	0.1385564817107278	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1250	0.11462316488313022	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	1238	0.11352278250025218	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	1099	0.10077668656524809	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGCGT	15	0.0010299757	84.99106	8
GTGGTAT	1235	0.0	57.815636	1
CCGCGTA	25	0.0077993874	50.994637	9
TGGTATC	1565	0.0	47.247425	2
GTACACG	45	2.9260413E-5	47.22375	1
AGCGTCA	210	0.0	44.52117	3
ATACGGG	295	0.0	43.22174	1
TACACGC	60	3.2110238E-6	42.49553	2
GTATCAA	5540	0.0	41.427334	1
CGCTTAG	55	9.564853E-5	38.63407	6
ACGGGTT	45	0.0016634943	37.775536	5
TATCAAC	7175	0.0	37.550053	2
GTACGGA	70	9.251544E-6	36.426407	3
TCGCTCA	95	5.1417373E-8	35.785706	9
GTCGAGG	1215	0.0	35.325504	8
AAGTACG	535	0.0	34.954403	1
ATAACGA	50	0.0027897349	33.997986	4
CAACGCA	7970	0.0	33.69938	5
TCAACGC	7985	0.0	33.689297	4
ATCAACG	7985	0.0	33.58285	3