EGAF00005412572 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412572
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121724
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	460	0.3779041109395025	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	312	0.2563175708980973	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	248	0.20373960763694918	No Hit
CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGT	209	0.17169991127468698	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	170	0.13966021491242483	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	160	0.1314449081528704	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	156	0.12815878544904866	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	148	0.12158654004140515	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	124	0.10186980381847459	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	123	0.10104827314251916	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGAGTCC	15	0.0010273341	85.00001	5
AAGTACG	35	6.575445E-6	60.71429	1
GTGCACG	25	0.0077796117	51.0	1
GTGGTAT	190	0.0	44.736843	1
GGACTGG	40	9.28654E-4	42.5	1
GACTGGA	50	5.423181E-5	42.5	2
GTATCAA	765	0.0	41.666664	1
TGGTATC	215	0.0	39.534885	2
TCGAGGT	165	0.0	38.636364	9
ATACGGG	45	0.0016572102	37.77778	1
TATCAAC	965	0.0	36.11399	2
TTATACT	60	1.5871727E-4	35.416668	4
TATACTT	75	1.4728499E-5	34.0	5
CAACGCA	1050	0.0	33.190475	5
ATCAACG	1050	0.0	33.190475	3
TCAACGC	1070	0.0	32.570095	4
AACGCAG	1090	0.0	31.972477	6
AGTCGAG	230	0.0	31.413046	7
GTCGAGG	225	0.0	30.222221	8
GGTATCA	375	0.0	29.466667	1