EGAF00005412591 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412591
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	38421
Sequences flagged as poor quality	0
Sequence length	61
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	98	0.2550688425600583	No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGCTTGCTTCTCCT	46	0.11972619140574166	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	43	0.11191796153145415	No Hit
GTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCT	39	0.10150698836573749	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTAAGA	15	0.0057418216	54.9987	54
TTTTCCG	15	0.0057418216	54.9987	54
CCTGGAA	25	7.762592E-4	43.998955	48
TGGTATC	40	3.8416965E-6	41.24902	2
GTGGTAT	45	8.54795E-6	36.7136	1
CGCTTTT	30	0.0019027871	36.665802	52
ACGGGGG	40	1.8678914E-4	34.374184	16
GCGCCTC	35	0.0040513915	31.427828	41
CACTGCG	35	0.0040513915	31.427828	9
CCTCGCT	35	0.0040513915	31.427828	44
CGCCTCG	35	0.0040513915	31.427828	42
GCTTCGC	35	0.0040513915	31.427828	48
TCGCTTT	35	0.0040513915	31.427828	51
GCCTCGC	35	0.0040513915	31.427828	43
CTCGCTT	35	0.0040513915	31.427828	45
CGCTTCG	35	0.0040513915	31.427828	47
AGAGTAC	160	0.0	29.218056	11
GTATCAA	250	0.0	27.535204	1
TCCTGGA	40	0.007781206	27.499348	47
ACTTCGC	40	0.007781206	27.499348	24