EGAF00005412632 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005412632
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	323222
Sequences flagged as poor quality	0
Sequence length	91
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1389	0.42973559968071484	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	853	0.26390530347562974	No Hit
ATATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	768	0.23760758859236067	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	731	0.22616034799611412	No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	530	0.16397398691920723	No Hit
ATATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	493	0.15252674632296068	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	457	0.14138889060769377	No Hit
GTATCAACGCAGAGTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	421	0.13025103489242687	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	380	0.11756625477226179	No Hit
GGAATGTACAGTGCATATTGGCGGCGCACGCCTCATTACGATTCGCCTGC	365	0.11292548155756724	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	340	0.10519085953307634	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTCA	55	0.0	77.27146	3
GCGTCAG	65	0.0	65.38355	4
GCGTCCC	20	0.0032215952	63.748955	8
AAGTACG	215	0.0	55.365063	1
GCTTGGG	25	0.007791718	50.999165	2
CCATGCG	25	0.007791718	50.999165	9
CTAGTAC	25	0.007791718	50.999165	3
CGTCAGA	90	1.2732926E-11	47.221447	5
TGGTATC	555	0.0	45.17944	2
GTGGTAT	535	0.0	42.90977	1
ACAACCG	40	9.3102024E-4	42.499302	5
CGGGTAA	40	9.3102024E-4	42.499302	6
CCTAGGA	40	9.3102024E-4	42.499302	2
GAATACC	40	9.3102024E-4	42.499302	4
ACGGGTA	60	3.2020307E-6	42.499302	5
CGCTCGA	20	9.31713E-4	42.499302	22-23
GTATCAA	2415	0.0	41.36823	1
TCGAGGT	550	0.0	40.953873	9
GTCGAGG	575	0.0	39.91239	8
ATACTGA	65	5.550133E-6	39.23013	6