FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005412680

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412680
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences360942
Sequences flagged as poor quality0
Sequence length91
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCTCCGGATCACAGGAT4390.12162618924924226No Hit
GTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGA4110.11386871020828832No Hit
CTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGT3650.10112428035529254No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)