FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005412732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1641945
Sequences flagged as poor quality0
Sequence length91
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT46880.2855150446574033No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT33760.2056098103164235No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT22420.13654537758572913No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)