FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005412781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005412781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33567
Sequences flagged as poor quality0
Sequence length61
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG880.2621622426788215No Hit

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGC150.00573497155.044
ACGGGGT202.5771215E-455.016
GTATCAA1300.040.1923071
TACGGGG651.8590072E-938.07692315
ATCACCT300.001899134336.66666816
TATCAAC1500.034.8333322
AGAGTAC1700.030.73529411
CAGAGTA1750.029.85714310
GCAGAGT1750.029.8571439
ATCAACG1750.029.8571433
AACGCAG1800.029.0277796
TCAACGC1800.029.0277794
AGTACGG1800.029.02777913
CAACGCA1800.029.0277795
GTGGCTG400.00776648527.554
GAGTACG1900.027.49999812
CGCAGAG1900.027.4999988
GTACGGG1850.026.75675614
ACGCAGA2050.025.4878047
TACGGGA852.47559E-522.64705815
Produced by FastQC (version 0.11.5)