FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005413506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005413506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2057933
Sequences flagged as poor quality0
Sequence length91
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT41190.2001522887285446No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT29900.14529141619284983No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21170.10287021006028865No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)