FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005413523

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005413523
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2879
Sequences flagged as poor quality0
Sequence length61
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG110.38207711010767625No Hit
GGTATAAGGAGCACACAGCCGGCTTGCCTAGTAGCTGCTGTCTCTTATACACATCTGACGC30.10420284821118443No Hit
GGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCTCC30.10420284821118443No Hit
GCATCAGACTGAGGCCTTCATTGGTAGCTCGAGCAGTTCGACCACCTGTCTCTTATACACA30.10420284821118443No Hit
TGACCGGTTTGCCTAAACCGACCATTACCCGTTTAACGCCTGTCTCTTATACACATCTGAC30.10420284821118443No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)