EGAF00005413584 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005413584
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1120745
Sequences flagged as poor quality	0
Sequence length	91
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4630	0.41311805986196687	No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2705	0.24135731143123548	No Hit
GTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGA	1967	0.17550825566922001	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1930	0.17220688024483713	No Hit
ACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCAAATATCCTGTGATC	1457	0.13000281063042887	No Hit
ACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCTCCGGATCACAGGAT	1368	0.1220616643393457	No Hit
ACTATGTATTCATCATGCGATACCTACCTTATGGTAAGTGGGTTTCCCCA	1358	0.12116940071113412	No Hit
TCCCAGAGCTTTCCGCTAAAACACATATAACTTAATGGGCTGATCCCCGT	1324	0.1181357043752147	No Hit
CTACGGTAGCACTTCCCAGAGCTTTCCGCTAAAACACATATAACTTAATG	1152	0.10278876996997534	No Hit
GTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCTGCGATA	1138	0.1015396008904791	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	1410	0.0	51.541203	2
GTGGTAT	1615	0.0	45.53325	1
TACGTAG	60	3.2093594E-6	42.498886	2
GTATCAA	5115	0.0	41.384598	1
GGTATCA	2690	0.0	37.607956	1
TATCAAC	5895	0.0	36.118645	2
ATCAACG	6255	0.0	33.903984	3
TCAACGC	6230	0.0	33.903606	4
CAACGCA	6345	0.0	33.28912	5
AACGCAG	6470	0.0	32.90872	6
GTACGTA	65	2.5510322E-4	32.697285	1
CGCAGAG	7285	0.0	29.050789	8
ACGCAGA	7345	0.0	28.987055	7
GCAGAGT	7670	0.0	27.647976	9
CGTCAGA	250	0.0	25.49933	5
CAGAGTA	4920	0.0	25.308167	10-11
GAGTACG	5360	0.0	22.95313	12-13
AGAGTAC	4710	0.0	22.195879	10-11
AGCGTCA	295	1.8189894E-12	21.609604	3
AGTACGG	5200	0.0	20.104345	12-13