EGAF00005413882 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005413882
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1744696
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8585	0.4920628006254385	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6380	0.36567975165874167	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4986	0.2857804454185715	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	3480	0.19946168272295	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3262	0.1869666692650181	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	2370	0.13584028392338837	No Hit
ACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2123	0.12168308977609853	No Hit
GGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAA	1939	0.11113683988500003	No Hit
GGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1936	0.11096489015851473	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1832	0.10500396630702426	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	2985	52.678963	2
GTGGTAT	3075	51.007706	1
GTATCAA	12005	40.824577	1
GGTATCA	6180	38.448364	1
TATCAAC	13675	36.11259	2
TCAACGC	14455	34.163937	4
ATCAACG	14590	33.789562	3
CAACGCA	14820	33.379868	5
AACGCAG	15360	32.123352	6
CGCAGAG	16845	29.241842	8
ACGCAGA	17085	28.805368	7
GTCGAGG	1900	27.960741	8
GCAGAGT	17620	27.955664	9
GACAGGT	1075	26.096964	1
CAGAGTA	8825	24.85005	10-11
TCGAGGT	2105	23.62251	9
ATAGTAC	480	22.134953	3
GAGTACG	9955	21.81615	12-13
AGAGTAC	8530	21.798235	10-11
AGTCGAG	3165	21.61882	7