FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005413948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005413948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92
Sequences flagged as poor quality0
Sequence length91
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT22.1739130434782608No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT22.1739130434782608No Hit
CTATAGGTATAATAAAATAAAATAATTTTTTTTTGAATTCCACAGGGCAG11.0869565217391304No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA11.0869565217391304No Hit
ACGCAGAGTCGACTGTTTTTTTTTTATTTTTTTTTTTGAGTTTTTTTAAA11.0869565217391304No Hit
TATCAACGCAGAGTCGACTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTT11.0869565217391304No Hit
GTTTCAACGCAGAGTAGGGGAACCAGAGAAACCACGGTACCTGAAAGGGG11.0869565217391304No Hit
GAATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT11.0869565217391304No Hit
GAGTACGGGGAAAAGTTACCCGATGAGTTGTGTTTAGGGGTGAAAGGCCA11.0869565217391304No Hit
CTCCCCGCCCTCTGCAGATCTGGGCTCTACACCAAAAGGCTTCAGGCAAG11.0869565217391304No Hit
CCATTAGAAATATTCGCGGTTATTATCAGTATTATTGGTGTCACATTGAC11.0869565217391304No Hit
AAATAAACGAAGATTACTCTCATTTGTATTTAAAATCAATAATAATTTAA11.0869565217391304No Hit
CAGCACACCACAAGGTGGAGGACAGTGAAACATCAAGTACACTCATGAGG11.0869565217391304No Hit
CAATATGAATCAAACATCAAACATTTCAAGAACGAAACAATAAACAAAAA11.0869565217391304No Hit
GAGTACGGGGAAGGAACTAGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.0869565217391304No Hit
GACTTTAACTTGGAATGGTTAGATGAGAAGATTGTAGATTGGCGCAATGA11.0869565217391304No Hit
ACAGATAAGTGGCTCAGTTGAGCACAGCTATATTTTAACATCTCTTTGTT11.0869565217391304No Hit
GTCTTGAAGGTGCTCATCTCTTTTAAAGCTAATGATATAGAAAAGGCAGT11.0869565217391304No Hit
TTAATATATTAAAACAAAATTAAATTAAAAAAATAGAAAAAGTATACTAA11.0869565217391304No Hit
CTATTTGGGTGCCAGCAGCCTGGATATTCTGCCATGTTGCTACAGGTTCT11.0869565217391304No Hit
GCATCTCCACCTTCTACAAAATGGGTGGTCTTTTTCTTCATTCCACCTCG11.0869565217391304No Hit
CACAAATAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTGATCA11.0869565217391304No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG11.0869565217391304No Hit
TTCTTTACTAGTGTCTGTATATACTATGGGTTAATTTCACTGTTTACCCT11.0869565217391304No Hit
GCTTTACTTTGTCCACTTCATTATCAAATTAAATTTTATCTTCTTCATGG11.0869565217391304No Hit
CTGTTATCCCCAGAGTACCTTTTATCCCCGTACTCTGCGTTGATACCTGT11.0869565217391304No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT11.0869565217391304No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATCTT11.0869565217391304No Hit
ATCAACGAAGAGTACCCGATAATAAAAAAAAAGCTATAGAAATCTATGAT11.0869565217391304No Hit
CCTGGTAGTGGGTGCACAAATACATAAATCAATGATCAATCCTAGGTTTT11.0869565217391304No Hit
ACAAAAATGAACTATAAGTAAAAAAATAAAAAAAATAAAAAAAAACGTCG11.0869565217391304No Hit
GTTAGAAACAAGAAAACAAAAATAAGATACAACCAACCAAACAAAAAAAG11.0869565217391304No Hit
GTATCAACGCAGAGTACGGGATTTCAGCACACACTGACGCGCGGACGGAC11.0869565217391304No Hit
AACGTATTCACCGCGGCATTCTGATCCGCGATTACTAGCGATTCCGACTT11.0869565217391304No Hit
GGTGCATGATGCCCAAGGTGGGGAACACCCAGGTACTGGCTGGGGGCACT11.0869565217391304No Hit
GGTATCAACGCAGAGTGGCGGTTTTTTTTTTTTTTTTTTTTTGTAATGTT11.0869565217391304No Hit
CAGAACCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.0869565217391304No Hit
ATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAG11.0869565217391304No Hit
AACTTAACAACAAAGAGAACATCATTAATATTTAATATAATAATTATATT11.0869565217391304No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG11.0869565217391304No Hit
GAATGGAATGGAATGGAATGGAATGGAATAAAAGCGAGTACAGGGGAATG11.0869565217391304No Hit
ATCCAAAAACCGCATCTTCAAACCTCAATTATTATTATTAAATTTATATA11.0869565217391304No Hit
GGATTTCCTTAATAAAATCGGAAGCAAGGTTAGGCTGAGTGAGGGTGAGT11.0869565217391304No Hit
GTATCAACGCAGAGTACGGGAAGTCGCGGGGGTAATATAGGGATTCTAAC11.0869565217391304No Hit
CTACGGTAGCACTTCCCAGAGCTTTCCGCTAAAACACATATAACTTAATG11.0869565217391304No Hit
CTTGTAAACCGTGTATTGTTCCCGTAATCTGCGTTGATACCTCTCGCTTA11.0869565217391304No Hit
TATTATAGCTCAACATTTAGTATACCAAAGGCATACCCGTGTAAATCTAG11.0869565217391304No Hit
GTACACATAATGCACAGTGACCACGTAAGAGCGATGGGCACATCTGTCAT11.0869565217391304No Hit
CTTATTTTACTTCTTTTAGCTGTTTAACTTTGTAAGATGCAAAGAGGTTG11.0869565217391304No Hit
GATGAGATCATGCCAGCTCCAATCTACACTCAAAGGATCAATTTCACCTA11.0869565217391304No Hit
GGGCTACCAAGTTCCTCCAGGAGCCACATATACTGCCATTGAGGCTCCCA11.0869565217391304No Hit
CTTCTAAAAAATATAAAAATATAGGCCAGGCGAGGTGACTCAAGCATGAA11.0869565217391304No Hit
TATCAACGCAGAGTACGGGAAGGAAATAGGCAAAAAAAAAAAAAAAAAAA11.0869565217391304No Hit
CACTAACAATCAAAATCAAATCAAACAGAAAGACAAACCACACCACTAAC11.0869565217391304No Hit
ACGCAGAGTCGAGGTTTTTTTTTTTTTGTTTTTTTTTTTTTTTATTTAAA11.0869565217391304No Hit
AAAAGTACATTCTTCTAAAAAAAAATGAAAAATATGTTTATTTTTTTATG11.0869565217391304No Hit
TTACTGGATGATCGGTTATTTTTAAATGGCAACATCTCCTATGAACATCA11.0869565217391304No Hit
CTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAACAGTCTAGTGT11.0869565217391304No Hit
CAGCAACACTACTAACACTACTTGCAAACACAATTACACATCAGACATTG11.0869565217391304No Hit
CTGGTGATATGATTTGAACTCCTGGATTCAGAAAAAAAGCCAGCCCCACA11.0869565217391304No Hit
GCTAAAAGAAGTAAAATAAGAAGGCAATGATTGTGGAATTTACAGTGCAT11.0869565217391304No Hit
AAAAAAAAATAATATTAAAAAAATCACAAGAAAAAGAAAAAAAAAAAAAA11.0869565217391304No Hit
CAAATTGTGCAAAACTGGCTTGTGGCATCTGTTGATCTAAAGGCAGATAG11.0869565217391304No Hit
CGGCAGGGTCAGGCTTCTGGATATTGGGTATGATGGTGAGTCTTGTTCCA11.0869565217391304No Hit
ACAAAAAAAACAAAAAGAAAACAACAAACTCATGAAAACATAAAAACCAA11.0869565217391304No Hit
TAAAAAATCATAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAGACAT11.0869565217391304No Hit
ACCTTATCAATGACGGCAAGCTGATCAAGAACAATGACTCCACTGACTAT11.0869565217391304No Hit
TAACAGACCATCCTCACCTTTTATTTAAATTTATAAAATAATTAAAATAT11.0869565217391304No Hit
GCTTGAGGAAACCGCAGATAAGTTTTTTTATCTTTGAAAGATAGAGATTA11.0869565217391304No Hit
AATTTGAGGTACCTGTGGAACCATATGGAAATGCCTGCTACGTAGTTGGA11.0869565217391304No Hit
GGTTATCCTCAAGGCCACATAAATCCTGCTTCACTGCTTCTTGAACTCTG11.0869565217391304No Hit
ACAGCAGCATGAGTATCTATGACGATATTGATGCTGACGTGCTGCAAAAT11.0869565217391304No Hit
ACGTATTGGTTCATTTTATATGTTCAATGATTTTTTGGTGAATGTGTTTG11.0869565217391304No Hit
GTAAATGTAGAGGGCACTAAAACATTGCCAGATGATCAGACAGAAGTTGT11.0869565217391304No Hit
CTCCAGAATGACACAACAAAACCAAACAGAGAAAATAGCTCCATTAAAAG11.0869565217391304No Hit
CCCCAGACAGCCTTCCAGTCTCATGTCCAGCAAAGCAGAAGACTCCCAAA11.0869565217391304No Hit
GATGAAAAGTCGGTTGAGCCGTCTCTTGAATAGTGCCTTACAAGGAAAAG11.0869565217391304No Hit
GACTGGGGCACCGCTTCGTTCTCGGTCTCACTCCCCGCTGTGCCGTGCGT11.0869565217391304No Hit
GAACTATGCTGAAGGAACTAGGCAAAATCGTACCGTAACTTCGGGAGAAG11.0869565217391304No Hit
CCAAAAACTTCCTCTGAGAGACACCTTCATCTTCAGCACTGGTATCATCC11.0869565217391304No Hit
ATGCAGCTGCCTCTGCCAGGAGTCTACCAAATGAACAAATAGTGCAGAAG11.0869565217391304No Hit
TCCTGGCCTTTTGTATGTTATTTTTGATCATTTTGAGTTTTTTGTTTTTT11.0869565217391304No Hit
CTATAAAACACAATCTAAATAAAACTCATAGAAAAAATATCAAAATCACA11.0869565217391304No Hit
GTAACAACGCACAGTCGAGTATTATTTATTTTTATTAAAATTTATATTTT11.0869565217391304No Hit
ATACATAGTCATGCGAGGCGAACGAGGGGAAGTGAAACATCTCAGTACCC11.0869565217391304No Hit
CAACCACCACACTGAGCAGCACCAGGGGGTGGACCACCACCTTCTGCACT11.0869565217391304No Hit
GAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCAGAAGAGA11.0869565217391304No Hit
GAGTAAACAAATAATATTATAATTTTTTTTTTTTTTTTTTTAAATTTTTT11.0869565217391304No Hit
TGCCTGTAATGCTGAGAACCACACCTAACAAAAGGGAGATTGCATCACCG11.0869565217391304No Hit
AAAAAAAAAAAAGAAAAAAAAAATAATCATCATAGATTTAAAAAATAAAC11.0869565217391304No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)