EGAF00005414180 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005414180
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1669688
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8618	0.5161443335521366	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6963	0.4170240188586132	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4866	0.2914316926276047	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	3406	0.2039902065535597	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3219	0.1927905093646238	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	2340	0.14014594343374331	No Hit
ACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2209	0.1323001662586064	No Hit
GGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1850	0.11079914331300218	No Hit
GGGAATGAGAACGGAAAATCTCACTAAGGAAGACGAAGTCGATGGAGCAA	1806	0.10816392044501727	No Hit
GTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1782	0.10672652615338912	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	2935	59.655354	2
GTGGTAT	3025	58.326397	1
GTATCAA	12140	40.37877	1
GGTATCA	6185	38.081364	1
TATCAAC	13515	36.695694	2
ATCAACG	14540	34.22574	3
TCAACGC	14740	33.732517	4
CAACGCA	15125	32.845768	5
AACGCAG	15680	31.68318	6
GTCGAGG	2340	30.694262	8
CGCAGAG	17720	27.965406	8
ACGCAGA	17755	27.909447	7
TCGAGGT	2415	27.630062	9
GCAGAGT	18400	26.978909	9
CAGAGTA	8555	25.21247	10-11
AGTCGAG	3395	24.66038	7
GACAGGT	915	22.302963	1
GAGTACG	9825	21.802048	12-13
AGAGTAC	8520	21.225569	10-11
GTACGGG	10835	19.632156	14-15