EGAF00005414198 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005414198
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1810309
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7037	0.3887181691081467	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5836	0.32237590378217196	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4227	0.23349604956943815	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	3095	0.1709652882463712	No Hit
GTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGA	2700	0.1491458088094353	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2666	0.14726767640220537	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	2410	0.13312644415953298	No Hit
ACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCAAATATCCTGTGATC	2080	0.11489751197171312	No Hit
TCCCAGAGCTTTCCGCTAAAACACATATAACTTAATGGGCTGATCCCCGT	1908	0.1053963715586676	No Hit
ACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCTCCGGATCACAGGAT	1835	0.10136391080196806	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	3580	48.197258	2
GTGGTAT	3800	44.197407	1
GTATCAA	13120	39.083797	1
TATCAAC	14815	35.284405	2
AACGCAG	15870	32.88431	6
GGTATCA	7065	32.79953	1
TCAACGC	16055	32.55923	4
ATCAACG	16120	32.50704	3
CAACGCA	16295	32.131847	5
GTCGAGG	2170	29.376421	8
ACGCAGA	17985	29.017185	7
CGCAGAG	18040	28.881601	8
GCAGCGT	415	28.687536	1
GCAGAGT	18905	27.5826	9
AAGTACG	355	27.547537	1
GACAGGT	920	27.267635	1
AGCGTCA	460	26.792887	3
TCGAGGT	2465	25.171162	9
CAGAGTA	10395	24.387388	10-11
AGTCGAG	3325	23.901068	7