FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005414200

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005414200
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80
Sequences flagged as poor quality0
Sequence length91
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT22.5No Hit
CTTTTAGTTACTCAATAACTTTAAAGGTTGGTTGCAAAACTATTTTGTTT22.5No Hit
GTTTTTAACGTATGTTTAATAGCTTAAGAGTTTAAGAGAAAATATGAAGC11.25No Hit
ATTATATTTTTTATTTTATTTTTTTTTTTTGTTATAGTTGTATTTTATTT11.25No Hit
ACCATAGTCCGCAAGCCAGCGCGGGCACCGCAATGAACGTCATGAAGCGG11.25No Hit
AAGAAGATTATATCACTATAATTAATTTTTTTTTATTTTTTATTATGAAA11.25No Hit
TATATAAATAGAATGATGAAAACATAGTAATACCACCCGAAAGAGTTGAA11.25No Hit
GAATCGCTAGTAATCGCGGATCAGAATGCCGCGGTGAATACGTTCCCGGG11.25No Hit
TATAAAGGCAAACTCAAAAATACTTATAACACAACTAATATATTGAAATA11.25No Hit
CCAATTACCAACATTAATATTATATTTATTTAAAAATGTGAATGTCCAAC11.25No Hit
CTACAATATATATAAATTTATATATTTTATATAATCTGCCGCACAATTTG11.25No Hit
ATTAACTAACTTAACAAGCTAACGCTAAAATATATTGAACAGTTAAAAGA11.25No Hit
AAACAAAACAGTAGTTAAAAAGGTGGCTCAAAAGAAGTAAATTTCTATAT11.25No Hit
TTACAGAGATGGATTGGTGCCTTCGGGAAATTACATACAGGTGCTGAATG11.25No Hit
CTCCAAGGCTAAAAACTCCTGACAGAACCATACAGAACCACAACCCAGAC11.25No Hit
GTTTTCATAAATATAAAAATTAACAGCAGCATACAAAAAAAAACAATAAG11.25No Hit
GTCTCACTCTGTTACCCAGTCTGGAGTGCAGTCGTGCGATCTGGGCACAC11.25No Hit
CACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGTGGGGTGTGGGTGTT11.25No Hit
GGTGTACAGTGACAATGAACAACACATTTAATCCTTGCTATTGTGGAATT11.25No Hit
CTTATACACATCTCCGAGCCCACGAGACTCGACGTCATGTCGTATGGCGT11.25No Hit
ACACATCTCCGAGCCCACGAGACATGCGCAGATCTCGTATGCCGTCTTCT11.25RNA PCR Primer, Index 47 (95% over 24bp)
AACTTGCTGTAGACAAACAACTTAGAAACCACACTAACGACATCCACACC11.25No Hit
CATCAGTAATCTCAATAGAAAAGAGATATGTTTTCTGGAGTCATAAAGGA11.25No Hit
ACACAATACCCTTAGAAAAATAAATCAAATCATAATACCTCAGTATCGCA11.25No Hit
AAAAAAAAAAAAAAAAAAAAAAGACCAAGTGATAAAAAAAAAAAAAAAAA11.25No Hit
ACAATCAGTCAGTTCTCATTATTTCACATGGAAGCAAATATGTATTTTTT11.25No Hit
GACCGCCTCACCCAAGGAAAAACCGAACACTTCAGAAAAGCCTAGAGTCT11.25No Hit
ACACATCACTAGTGGCGGCTATACTAAACAAGTTAAGTGACATAAACGAT11.25No Hit
GCCAGAAAGCTTAGGTGCAATCTCGCTTGCGGGTCGCGAAAAATTAGACA11.25No Hit
CAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT11.25No Hit
TTTATCAACGCACAAAAATGAGTGAAAGTTATTGAAAACAACCAACAATA11.25No Hit
AACCACACAACACTAAAGATAATTTTAATAAAATAACTAACCACATCTCA11.25No Hit
GTCTCAGGAAATGGTGCATTTGGTGAACAAGGAGTCGTCAGAAACTCCAG11.25No Hit
ATAAATATATTGGTTTAAATTATCCCTTAGCCATTCAATATAATCTTTAT11.25No Hit
AAAAAGAACCACAAAATATAGTTAAATGCGAAAAAAAAAATAAATAAAAA11.25No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGACAAACGTAA11.25No Hit
CCAATAAAAATGATAGCCAATAAAACCCCAGAACAAAATAAATCACACCA11.25No Hit
CTTATACACATCTCCGAGCCCACGAGACTGCAGCTAATCGCGTATGCCGT11.25No Hit
ATGAATATCATAAAACATAAAAAATTAAAATTCCAACACCATTCCAAATA11.25No Hit
GTATCAACGCAGAGTCGACATTTTTTTTTTTTTTTTTTTTTTTTTTTTTA11.25No Hit
AAAAAGAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGACGGGGGG11.25No Hit
ATCCTGGCTCACTGCAACCTCCGCCTCCCGGGTTGACGCCATTCTCCTGC11.25No Hit
GAAAAACAAAAAAAAAATAAAAAGACATCTCAAAAAAACAAATTTAAAAA11.25No Hit
ACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATGG11.25No Hit
AAAAATAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAATTTTCTTTAAA11.25No Hit
ATCACCCTCTACGGTAGCACTTCCCAGAGCTTTCCGCTAAAACACATATA11.25No Hit
GGTATCAACGCAGAGTACGGGGAGCATTTCCGGCAGCCATCCCCGCGGGG11.25No Hit
ACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.25No Hit
CGATTGAACAGGAGAAGCAAGCAGGCGAATCGTAATGAGGCTTGCGCCGA11.25No Hit
GGGTACTGAGATGTTTCACTTACACTCGTTCACCGTAATCTGAGTTGATA11.25No Hit
GTATCAACGCAGAGTACGGGGGCGAAGCAACATCGAACTCAAAGCTATCA11.25No Hit
ATATAAAGATCGCCATTTTCACCACAGTTAATTCCAGCTCTGTCTCTTAT11.25No Hit
ATTAAAATAGATTAATTAAAAATCTGAAATTTAGAATTCCACATCAACTG11.25No Hit
GATCAAACAAAATGGTATAAAGCCTACTCGGGTTTTAAATGCCGCTTTAT11.25No Hit
AAACGAAACCAGATAAAACCATAACTATAAATAAGCTCAGTCTCAAAAAA11.25No Hit
AAAATGATGAGATTAAAAAAAACTAGAAGAAAACGCTCATCTCATATTGA11.25No Hit
TTCTTCTAATAAGCCTGTTGATCTCGTCCTCCCTGTTGCCAGCATCTCCA11.25No Hit
CAGTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTT11.25No Hit
ATATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATAGAATT11.25No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.25No Hit
TATCAACGCAGAGTACGGGCACAACTAAATACAAATATATACTAACAAAA11.25No Hit
GAGAATATATAATAATACATATAATAATAAGTATACTAAACCAACTCTCT11.25No Hit
GACAGGATTTGGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGAA11.25No Hit
GACTAGATGTGCCACTCTGGGCAAATGCTCTTCCTTGAGCCTGTTTCCAC11.25No Hit
ACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCTCCGGATCACAGGAT11.25No Hit
CGGAAAATCTCACTAAGGAAGACGAAGTCGATCGAGCAATCATCAAGGAT11.25No Hit
AAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAGCCAGGCC11.25No Hit
GACAAAAAATTACCTGCAACTGGATAGCGTAAGTGCAGTATAGCGAGACA11.25No Hit
CAACTCGATACCAACTCATCACTAACAATAAAAAAAACCAAAACAACAAA11.25No Hit
AAAAAAAAAAAACATTTTTATTTAATAATATATTATAATGTAAATATAAA11.25No Hit
AAACAGAATAGAATTTAATTTATATAAATTTAATTTAATTTAATGGAATG11.25No Hit
CCCCGAATCAATGTACCTAGCAGCAAAAAAGATTTCACAAATTTAAATGA11.25No Hit
CAAAAAGACTCACAAAAAGTGAAAAGAAACAAAAAACAAAAACCATGCTA11.25No Hit
ATCCATGATCTTTGGAAATGATAGGAGACGATTTTTAGAGGGGAAGAGTG11.25No Hit
ACATAAAGAATGAAAAAAAAAAAAATATAAGAAAAAAAAAATAGATAAAA11.25No Hit
GGGCAATGCTTTAAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTT11.25No Hit
GTATCAACGCAGAGTAGGGGAGCTCTAAGTTACCCATAAAAAAACACAGT11.25No Hit
GAAACAAAAAGCTAAGGGCAAAATGTACAAACTTAGAAGAAAATTGGAAG11.25No Hit

[OK]Adapter Content

Adapter graph