EGAF00005414344 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005414344
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1409950
Sequences flagged as poor quality	0
Sequence length	91
%GC	42

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2184	0.1548991098975141	No Hit
ATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTCATC	2047	0.14518245327848506	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1862	0.1320614206177524	No Hit
ATACTATATAGGTGGCTATCTATCCCTACCAAGGCTTATATTGAAGTATA	1847	0.13099755310472003	No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC	1749	0.12404695201957516	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1575	0.1117060888683996	No Hit
ATTTAGGGCTATTGATATTTAACAAATATCCAGCAAAGGTTTTTCCAGGA	1460	0.10354977126848469	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTATC	1010	0.0	39.974678	2
GTGGTAT	1020	0.0	39.170277	1
GGTATCA	1785	0.0	37.146282	1
GTATCAA	3475	0.0	35.96015	1
TATCAAC	4055	0.0	33.014328	2
ATCAACG	4170	0.0	32.00308	3
GCGTCGG	80	2.3089106E-5	31.872288	9
ACGGGCG	95	2.0750795E-6	31.315346	5
CAACGCA	4290	0.0	31.205853	5
TCAACGC	4415	0.0	30.322334	4
AGCGTCA	225	0.0	28.333939	3
GCGACCG	30	0.0068065277	28.333937	46-47
CGGGCGT	90	5.1564406E-5	28.332932	6
GGGCGTC	90	5.158934E-5	28.330923	7
AACGCAG	4735	0.0	28.183338	6
AGTCGAG	1000	0.0	27.197683	7
GGCGTCG	95	7.455406E-5	26.839823	8
GTACGGC	80	8.6113525E-4	26.563065	3
CGCAGAG	5230	0.0	25.514082	8
TCGAGGT	785	0.0	25.443693	9