FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005414367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005414367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116
Sequences flagged as poor quality0
Sequence length61
%GC31

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATCAACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTATTAAGTTAAGTAGATA10.8620689655172413No Hit
GAATGAAAGATATGGAACAAAAGAAGCCAATAGCATTATTTATATGGCAAAATATGCGGGT10.8620689655172413No Hit
CAGTGAGCCCTGATCTGCGTTCTCTGAAATAGATCTTACCAGACTGCAGCAACCCCTTCAG10.8620689655172413No Hit
ATCCGAACAGACATAGAGAAATTACTAGAAATTTTAAAAATCCCAAAAGTGAAAGACCAAA10.8620689655172413No Hit
TAAAAAGTATATTAAGTTAATTTATAAAAATTTTTAATACAGTCAAACGTTATATGAAATT10.8620689655172413No Hit
AATATCACTCTCCTACTTACAGGACTCAACATACTAGTCACAGCCCTATACTCCCTCTACA10.8620689655172413No Hit
TTTTCTATCTTGTTTCTATCTTCCAATTTTCTTCTAAGTTTGTACATTTTGCCCTTAGCTT10.8620689655172413No Hit
CATTAATATCCAAAGAAAAAAACTGATTACTAAAAAACAATTATTGATAAAAAAAAAAACT10.8620689655172413No Hit
TGCTCGACGGGGTAGTACTGAAAAGCAGCAGGCAGAATGACTCTGCTAAACCTCCTACCCA10.8620689655172413No Hit
TTTTTGTATATCTTGATTATTACATTTTGATTTTTTTTTATATATGCCTTTTTATATTATT10.8620689655172413No Hit
AATAAATATAGACTTACTGATCAAAATAATAAAAATAAATCACTAATAATTAAATAAAAAA10.8620689655172413No Hit
ATTGCAAACATAAGTTAACGGTGTTAAATCCTCAATCCGCACAAACTTCATCCCCGAGACG10.8620689655172413No Hit
AAGTAATTAAGTGAATGTGGTGGATGCATTGGCAGTCAGAGGCGATGAAAGACGTAATAGC10.8620689655172413No Hit
ACGCAGAGTCGCCTTATGTTTTTTTTTTATTTTTTTTTATTTAGATGATGTGGGTGAAGAA10.8620689655172413No Hit
ATAAATACCAGAGACTATCAACAATTAAGAGTACTAACTAAGACTAATAAAATGAGTATTT10.8620689655172413No Hit
GGTATCAACGCAGAGTACGGGAGTGTGAAATCTTCAGAGAAGGATTTCTCTTTAGTTCTTT10.8620689655172413No Hit
CGCACCTAGGTAGATTTATAATAAAAATAATTTACATTTTATCAGTTGCCACGTCAACGTA10.8620689655172413No Hit
GAGAAGAAATAATATTAATTTATTTTAAAAAATTATAAAAAAAAAAAAAAAAATAAAAAAA10.8620689655172413No Hit
AACAAAACCCTAACTATGATAAAAAAATAAAAGAAACAAAAAAAAAAAACAACAAAAAAAA10.8620689655172413No Hit
TGCCAAACCACTGCAAAACTCTCAAATTGCAGTCAAATGGAAATGCTGGCTGTAAACCACA10.8620689655172413No Hit
TCAACGAAGCTTATCTCAGGCTATTACCTGTCTCTTATAAAAATATGACGATGCCGACGAA10.8620689655172413No Hit
GTAATAAAGTTAATATGGTTTATTAATTTGAAGTAATATGATATGAAACACGTAATAGACT10.8620689655172413No Hit
GAGTGTAGATCTCGGTGGACGACGTATCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.8620689655172413Illumina Single End PCR Primer 1 (95% over 21bp)
GCATTACCATACCGTTAATTACATAGGTTTATAAGGTGAGTTTATATTTTGGGATTCTCTG10.8620689655172413No Hit
CTCCACGAGGGTTCAGCTGTCTCTTACTATTAACCAGTGAAATTGACCTGCCCGTGAAGAG10.8620689655172413No Hit
CAATAACAGCTGATAATAAATTTATATTATTTATAATTTTATTTTTTTATTTATTAGAAAA10.8620689655172413No Hit
CATAAAACAAAATAGTAAAATACCCCTTCGCTCTCAGCAACATCGATAAACTAAAATCAAA10.8620689655172413No Hit
GTAACAACGCAGACAACGGTCATATAAATAAATAAAAAAACTGACTCATATAAACATCTTA10.8620689655172413No Hit
AAACAAACAAGCCCTAAATAATAATATTAATAATATAAATAAAATACCTACGCATCCTTTA10.8620689655172413No Hit
CTGCCGCCAGGATGTGACCATGGACCACGTTCTCAACAAAGGTAAAGTACACCAAGTTCTT10.8620689655172413No Hit
ATCTACAAGCGTCGTTATGGCAAAATCAATAAGAAGCGAATTGCTTAGACAGAAAACGCAA10.8620689655172413No Hit
TACCTGAGGTTCATCATCTCATACCAAGGAAATCGAGCTGTCTCTCATACACATCTGACGC10.8620689655172413No Hit
GTACGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAACACAAAAGAGTATAAAAAAAAAAGG10.8620689655172413No Hit
AATCAAGAGTAGAGACTAGTATCTTCCCTGTTTATGAATAAAGAAATAAAAAAAATGAAAT10.8620689655172413No Hit
ACTATGTATTCATCATGCGATACCTACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCT10.8620689655172413No Hit
TATCAACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGATTT10.8620689655172413No Hit
ATATATGGGGATAACATTTTAATTTGAAGGTTTGGAATATATATATTTAAGCTTTATTTCC10.8620689655172413No Hit
GGATGAGACAATGAGAGAATTTTTAGAGTTGACAGAACAGAGTCAAAAATTACAGATTAAA10.8620689655172413No Hit
GATCAATTGAGTATAGTAGTTCGCTTTGACTGGTGAAGTCTTAGCATGTACTGCTCGGAGG10.8620689655172413No Hit
CACCTAGTCAGGCAGTATTCCGTCTACATTCTTTAATCTGCCATCTCTTACGAGAAACTTT10.8620689655172413No Hit
GTTATAAATGTGGGGAAAGTGGACACTTAAGTTATGACTGTCCGAAAAATATGCTCGGAGA10.8620689655172413No Hit
ATACTGCGAGAAATTCGTGATGAATTAAATAAACGCCCTGAAGCTTAATATACATCAAATT10.8620689655172413No Hit
GTAAAAACGCACAGTAGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAATA10.8620689655172413No Hit
AACTAACTGGCATCAACACTGGGTGTAGAAACATGCTTGCCTTATGTATCAGAGGACATGC10.8620689655172413No Hit
GTGGTATCAAAGCAGAGACGAGTTTTATTTTTTTTTTTTTTAATTGTTTTTTTTTAAGGCA10.8620689655172413No Hit
GGTAAAAAAAAAGAAAAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAACAAGGAA10.8620689655172413No Hit
GTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGC10.8620689655172413No Hit
AAACCAAAACCCCAAATCACAACAAAACCAAAAACAAACCCCAAACAAAAAAAAAAAAAAA10.8620689655172413No Hit
GTGTTTCCCTCCCGTGAGTTCTCGCACAGGTTGTGAGATATAAGGACTCAGCATCATGAAA10.8620689655172413No Hit
CATCTGTTTCTGAGGGTTTCGTTTATTTAATTGTAATGGGTGGGCTTGTTACAGACTATTA10.8620689655172413No Hit
GAATGACACCATTTTGATTGGTGACTCATTATAGATGACAATCAAAAGGCATGATTCTACC10.8620689655172413No Hit
GTGCATGTGGTGGATGCCTTGGGAGTCAGAGGCGAGGAATGAAGTAATAGCCTGCGATAAG10.8620689655172413No Hit
GTGGTTTGGGTGGCTCAGGTTGGCCAAGGGGAGTGGGGTGGCGGGATGACTACTCTGTAAC10.8620689655172413No Hit
GTACTATATACTATTACCTTTGAATGTGTTTGCAGAGCTAGTGGATGTGATTGTCTACAAC10.8620689655172413No Hit
CTCCCACCCCAAAAATAAAAACACAACAACAACTCACACCACGAACCCAAGATAAAACAAC10.8620689655172413No Hit
GTGGTATCAACGCAGAGTCGAAATATTTTTTTTTTTTTTATTTTTTTTTAAAAAAAAAAAA10.8620689655172413No Hit
CATTAGTACCGACCATAGTAGCACGGGTGTATCCCTATTCGTAAAACACAACAACACATAA10.8620689655172413No Hit
GTGGGATCCACGGATACTCCCATGGGTTTTTTTTTATTATTTGGTTTTGTTTTTTAATATA10.8620689655172413No Hit
TGCCATAGCTGAGAGAAACTGGATCAACCAACCGAGGCTGGCATCATACACACTCATGTCA10.8620689655172413No Hit
GTGTTAACCAGGATGCTAACGGACTAATTGTAGAAATATTAAAATATTTTACTAACAGTGC10.8620689655172413No Hit
CAAATTAGATTATTTTATATATAAAATAATTATTAATATCATCAGAATAAAGGTTATAGAA10.8620689655172413No Hit
ATCACATATAAATAGACGAATCATAAATAAATAAAAACAAAAAAAATAAGCAAACAGTTTT10.8620689655172413No Hit
GGTATCAACTAAGCGTCGACATTGTTTTTGTTTTTTTTTTGTTTTTTTTTTTTGTAGAATT10.8620689655172413No Hit
CTACACATGGGGCGCTGTGGGCGCCGTGGGGCTGGTGTGGGCCACCGATTGGCGGCTGATC10.8620689655172413No Hit
GGCTATGTCCTCCAGTGAGGCCAAATATCAATCTGAGGGGCCACAGTAATTACAAACTTAC10.8620689655172413No Hit
ATTAAATTCCATTCCATTCCGTTCCAATCCATTCCATTACAATCGAATTCATTATATTAAA10.8620689655172413No Hit
TCACAGTGATGTATGGTCAGACTTACCAGCCCCAATTGTTAAACACTTGGATCAAGTAATA10.8620689655172413No Hit
CTGTAGTCCTTCTAAAGGAGGACATCGCAGTCAAAAACTCTCAGTAAAGCTGTATTTTGTA10.8620689655172413No Hit
CACAATTAATCTTTCCATTTTCGTCAGCGTTAAGAAAATGCGTTAACTAGGCATTAAATGA10.8620689655172413No Hit
GAGCATGCTATTAATTAAATTTTTGTAGTATTTATGTTTCAACATAATATGCTTTGATAAC10.8620689655172413No Hit
GTTAAACTGGTTATTATCCCGAATTCCCAACATCCACGGTATAAGAAAAAAACAAGGCAGT10.8620689655172413No Hit
GTTTAAACTAAGAGTCGACTTTTTTTTTTTAATTTTAATATTATTTTTGTTTTGGTAGGTT10.8620689655172413No Hit
AACAAAAGGCAAAGATTTATTGTCTCAAAGAATAAAATGTACATAACAAAGACAAAACCTA10.8620689655172413No Hit
GTGGTATAAACGCAGAGTCGAGTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGT10.8620689655172413No Hit
ATATATAATAACATAATCATAAATATTCATTTATGATAAATATATTTTTAACAAACAATAA10.8620689655172413No Hit
GGTTTATTTTGTATATGTTTAGAACTCTCTGATTTTGATGAATTATATGGGAATGAGAAAC10.8620689655172413No Hit
AGTAATTATAGTAAGTTGTATTGGTGGATTTAATTATATATATGTTATAACAACTCTCTCT10.8620689655172413No Hit
GAGATGTGATGTGATAACAAAGAAAAAACCTATGCACCCGTACTCTGCGTTGATACCTGTC10.8620689655172413No Hit
ATATAAAAAACACATAAAAACAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAA10.8620689655172413No Hit
TATTTTTAGTTTTATTAAATTTTTTTTAACACCCACAGGTATATGGGGTTTTACATTGGCA10.8620689655172413No Hit
CTATAAATCCTTGTAATGAACACAGCTACTAAAATGTACATATAATATTTTAAAGACTCTT10.8620689655172413No Hit
GTATCAACCCATAGTAGAGCGTATTTTTTTTTTTTTTTTTTTTTTTTTAATGATTTTTTTT10.8620689655172413No Hit
CTTCTTGACGAACTCGGCATGGACTTATGTTGACTTTCACACTACTTTCAGCATCAACATT10.8620689655172413No Hit
ATGTGCGCAGACACGACGGTTATTATATGAATTTGTGTGTAGTTGGTTGTTGGTTGAGAAC10.8620689655172413No Hit
ATCAACATTTTTGTAGATCTCACAATGAATATTACAAGGAAAAAACAGTAACAAATAATGT10.8620689655172413No Hit
CAGTTTCCAGTTCATTTTAAACATTGTAATTTATGCAAACAGAATCCTAATTATCATAGTA10.8620689655172413No Hit
GACAGATCATCTCACTGAGGGTGACCCCGTAGGCTAAGAATGAAAAACTAGGGCACATTAC10.8620689655172413No Hit
GTCATAACCTTGACAACAGATTGAATTGAAGATAGCAAACTAACATTATACTGGCGGAGCA10.8620689655172413No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG10.8620689655172413No Hit
GTCCTCTATTCTTGAAGAGCGTATTCTTGGAGCTGATACCTCTGTTGATCTTGAAGAAACA10.8620689655172413No Hit
CATTAAATAAGATTGGTTAAAAAGAACAATACCTTAAAATAAAAAACTGAAAAAAAAGAAA10.8620689655172413No Hit
GTATCAACGGAGAGTGCGGGAAAAAAAAAAAAAAAAAATAAATAAGAAAGGGGGGGGGAGG10.8620689655172413No Hit
AAAAAAAATAAAACTAAATAATCGATAATAATAAATAAAAAAAATAAATAAAGAAAACATC10.8620689655172413No Hit
TTAATAAAAAGTGAATAATTTTAAATAAAATCATAAGAAATACAATATTAAAAAACAAAAA10.8620689655172413No Hit
GGATTGTTTTCCTCTGGGCTACGGCCGGTAGCGCCCGCAGGCTGTCTCGCGGAGAGGGCTC10.8620689655172413No Hit
GAGCTAAGCTCACTAACGACTTCATCGTTTGTCAAGTACTCTGAGTACAAACATGTCTCTT10.8620689655172413No Hit
CACCCGTCCGCCGCTAGGTCAGTTACCGAAGCAACCTCCCCCGCTCGACTTGCATGTGTTA10.8620689655172413No Hit
AAGCAGAATCTAAAATAATTTATAATTATTAATTTATTAAATAAAAAAATTTTAAAAAAAA10.8620689655172413No Hit
TATTTTTAACCGAAACAATCAAAAAACCAAATCACCATACCACAATAAATAAACAACATAT10.8620689655172413No Hit
GTCAGAGGCGATGAAAGACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCATATATCCT10.8620689655172413No Hit
CTCCAGGCACCTAGAACTCGCACCTGAAATCTCCAGTATTGTAATGAAGTCACATATAAAC10.8620689655172413No Hit
GTCATGTCGTTTTTGTTATTTCTATGGAAATTTAAGGAATAGACGGTTAAGATTATACTAA10.8620689655172413No Hit
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATTT10.8620689655172413No Hit
AATCTCCCTGCGTCATAGATTTCAAGGTCTTTTAATCACCTTCTGAATAATCTCTTTTTAA10.8620689655172413No Hit
ACAGGTATCAAAGCAGAGTCGAGATTTTTTTTATTTTTTTATTTTTTTTTTATGAGCAGTT10.8620689655172413No Hit
TAGCTTGGTTGCGCGGTAGTTTAATGGTTTGATAGTTTAGGAGTAGTTTGTGGGTCGAATT10.8620689655172413No Hit
TGCTGAAACCTCAGATAAGTTATTTTTATCATTGAAAGATAGAGATTAATACAACTACTTA10.8620689655172413No Hit
TATTTAACTACTACTTATCAAAGTGCTATAATAAAAAAATATAAAAAAAAAAAAAATAAAA10.8620689655172413No Hit
GGATCGTAGACCTCGTCTGTTATGTAAATGATGAGTAGATATGGGAAAGCGATGAGGACTA10.8620689655172413No Hit
ATAATACAAAAAAGCATAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGG10.8620689655172413No Hit
TTTTAAGTTAATTGTATTTTTATAAAGTTTTAATAATTTTTTAATATTTTTCTATTTATTT10.8620689655172413No Hit
GTATGTAAGCAGGGGAGTGGTTGTTTTTTTTGTTTTTTTGTTTGTAAATGTAGCTGTTTTT10.8620689655172413No Hit
ATCACCATAAATCTGAAACATCACAACCAATTAAAAAACATGTCAATTCTCTATATTAAAA10.8620689655172413No Hit
CATGGGTGTAGGTGCAGATTCAGCTGACAAGAAATAAAAAAAAAAAAAAAAAAAAAAAAAA10.8620689655172413No Hit
CAACCAAACAAAAAAAAAAAAAAAAAATGTAATAAAAAAGGAAAATAAAACAAAATAAACA10.8620689655172413No Hit
GTTATAACAACTTAGAATGGGAAGGATGTGAGCTTTTATATGAAAACAGGTCGAATCTCCT10.8620689655172413No Hit

[OK]Adapter Content

Adapter graph