EGAF00005414371 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005414371
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	402558
Sequences flagged as poor quality	0
Sequence length	61
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	5541	1.3764476174861757	No Hit
GTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCT	622	0.1545118964223789	No Hit
ACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCTCCGGATCACAGGATATTTGCCGCCT	481	0.11948588774785247	No Hit
ACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCAAATATCCTGTGATCCGGAGATTTCT	476	0.11824383070265651	No Hit
GTATCAACGCAGAGTACGGGGTCAAGTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCA	421	0.10458120320550084	No Hit
GTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCTGCGATAAGCTTCGGGGA	416	0.10333914616030486	No Hit
ACTATGTATTCATCATGCGATACCTACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCT	411	0.10209708911510888	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACCGCG	35	8.661595E-5	39.2827	7
CGGCTGC	40	1.9002141E-4	34.37236	12
GACAGGC	35	0.004090564	31.437878	1
AGTCCGG	70	1.6038211E-7	31.430063	54
AGGGAGC	35	0.004098037	31.426159	6
TGGTATC	1065	0.0	27.888647	2
GACAGGT	130	3.6379788E-12	27.508142	1
TAGTCCG	80	5.1632196E-7	27.501305	53
GAGCTCA	40	0.007870106	27.497889	29
ACGGTCG	40	0.007870106	27.497889	5
AGCCGGT	50	7.027082E-4	27.497887	31
TTAGCCG	50	7.027082E-4	27.497887	29
TAGCCGG	50	7.027082E-4	27.497887	30
AGTTAGC	50	7.027082E-4	27.497887	27
GTATCAA	4060	0.0	27.30488	1
GTGGTAT	1100	0.0	26.507847	1
AGAGTAC	3930	0.0	26.378382	11
CAGAGTA	3935	0.0	26.344864	10
CGGGATA	95	7.941344E-8	26.053865	17
AACGCAG	4400	0.0	25.060575	6